Miyakogusa Predicted Gene

Lj5g3v1988690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1988690.1 Non Chatacterized Hit- tr|J3MAK4|J3MAK4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G1,86.67,4e-19,coiled-coil,NULL; seg,NULL,CUFF.56425.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g24610.1                                                        89   9e-19
Glyma16g29840.2                                                        89   1e-18
Glyma16g29840.1                                                        89   1e-18
Glyma20g30210.1                                                        82   1e-16

>Glyma09g24610.1 
          Length = 199

 Score = 89.0 bits (219), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 52/78 (66%)

Query: 1  MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALATSAAIISELXXXXXXXXX 60
          MD+MACN              DELDRLKQAEKKKRRLEKALATSAAIISEL         
Sbjct: 1  MDTMACNKGQNVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQIKKE 60

Query: 61 XXXRLDEEGAAIAEAVAL 78
             RLDEEGAAIAEAVAL
Sbjct: 61 EQQRLDEEGAAIAEAVAL 78


>Glyma16g29840.2 
          Length = 205

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 52/78 (66%)

Query: 1  MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALATSAAIISELXXXXXXXXX 60
          MD+MACN              DELDRLKQAEKKKRRLEKALATSAAIISEL         
Sbjct: 1  MDTMACNKGQTVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKE 60

Query: 61 XXXRLDEEGAAIAEAVAL 78
             RLDEEGAAIAEAVAL
Sbjct: 61 EQQRLDEEGAAIAEAVAL 78


>Glyma16g29840.1 
          Length = 205

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 52/78 (66%)

Query: 1  MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALATSAAIISELXXXXXXXXX 60
          MD+MACN              DELDRLKQAEKKKRRLEKALATSAAIISEL         
Sbjct: 1  MDTMACNKGQTVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKE 60

Query: 61 XXXRLDEEGAAIAEAVAL 78
             RLDEEGAAIAEAVAL
Sbjct: 61 EQQRLDEEGAAIAEAVAL 78


>Glyma20g30210.1 
          Length = 188

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 52/78 (66%)

Query: 1  MDSMACNXXXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALATSAAIISELXXXXXXXXX 60
          MD+MACN              D+LDRLKQAEKKKRRLEKALATSAAIISEL         
Sbjct: 1  MDNMACNKGQHVRKAKKKQVKDKLDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKE 60

Query: 61 XXXRLDEEGAAIAEAVAL 78
             RL+EEGAAIAEAVAL
Sbjct: 61 EQQRLNEEGAAIAEAVAL 78