Miyakogusa Predicted Gene

Lj5g3v1973360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1973360.1 Non Chatacterized Hit- tr|B9FH16|B9FH16_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,30.56,0.000000000000004,F-box domain,F-box domain, cyclin-like;
seg,NULL; A Receptor for Ubiquitination Targets,F-box
domain,CUFF.56294.1
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g37390.1                                                       232   2e-61
Glyma20g30350.1                                                       120   7e-28

>Glyma10g37390.1 
          Length = 286

 Score =  232 bits (592), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 119/207 (57%), Positives = 149/207 (71%), Gaps = 12/207 (5%)

Query: 1   MAISEYKNAIVSYKRRSQAHHHIEDGHVEEGSFELPRDILENIFSSLDMQSLVSAGLVCR 60
           +A++E+K+A+V++KRR +AH       VE+GS  LP+DIL  IFS LDM+SLVS GLVCR
Sbjct: 90  VAVTEFKHAMVAHKRRCKAHQ------VEKGSLPLPQDILVLIFSFLDMKSLVSVGLVCR 143

Query: 61  SWSVAANDNHLWELQYGVLFGAAKQRATRLVENRNSRLFSEPIDSTTITDWKEAVKKAYN 120
           SW++AANDNHLWE+QY  LFG    RA +LVE +N+RL  EPID+  ITDWKEAVK AY 
Sbjct: 144 SWNIAANDNHLWEMQYVALFGG---RA-KLVEGKNNRLLLEPIDTRIITDWKEAVKGAYT 199

Query: 121 GSLSKKLSTNRGYCEHCETVVWLNNSKCPNVWCGRMSRNQNVKQLTTLQVVEYILNXXXX 180
           G+LS+ L+T+RGYC HC++VVWLNNSKCPNV  G +S  Q++K +T  Q VEY+L     
Sbjct: 200 GALSRILTTSRGYCGHCKSVVWLNNSKCPNVHSG-ISEIQDIKPVTAFQAVEYVLE-DSL 257

Query: 181 XXXXXXXXXXXEEEGPVSRLWAYPKHI 207
                       E G VSRLWAYPKHI
Sbjct: 258 SVTSSSDSDSDSEGGTVSRLWAYPKHI 284


>Glyma20g30350.1 
          Length = 203

 Score =  120 bits (302), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/124 (49%), Positives = 84/124 (67%), Gaps = 15/124 (12%)

Query: 1   MAISEYKNAIVSYKRRSQAHHHIEDGHVEEGSFELPRDILENIFSSLDMQSLVSAGLVCR 60
           +A++++K+A+V +KRR               S +LP+DIL +IFS L+M+SLVS GLVC 
Sbjct: 76  VAVTKFKHAMVVHKRRC--------------SLQLPQDILAHIFSFLEMKSLVSMGLVCW 121

Query: 61  SWSVAANDNHLWELQYGVLFG-AAKQRATRLVENRNSRLFSEPIDSTTITDWKEAVKKAY 119
           SW++AANDNHLWE QY  L+G  AK +  +L+E +N  L  EP+D+  ITDWKE+VK AY
Sbjct: 122 SWNIAANDNHLWEKQYVALYGNRAKPKPAKLIEGKNDGLLLEPVDTRIITDWKESVKGAY 181

Query: 120 NGSL 123
              L
Sbjct: 182 TCKL 185