Miyakogusa Predicted Gene
- Lj5g3v1949500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1949500.1 tr|F2DTP1|F2DTP1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,32.85,5e-19,OS12G0152900
PROTEIN (FRAGMENT),NULL; CAMP-RESPONSE ELEMENT BINDING
PROTEIN-RELATED,NULL; basic regi,CUFF.56204.1
(242 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g36820.1 123 2e-28
Glyma08g19590.1 102 4e-22
Glyma15g05440.1 96 3e-20
Glyma08g08220.1 92 6e-19
Glyma05g25200.1 72 6e-13
Glyma05g25200.2 63 3e-10
Glyma15g05440.2 62 4e-10
Glyma19g37910.1 58 7e-09
Glyma06g04350.1 57 2e-08
Glyma13g03880.3 57 2e-08
Glyma13g03880.1 57 2e-08
Glyma13g03880.2 57 2e-08
Glyma04g04170.1 55 5e-08
Glyma10g08370.1 54 1e-07
Glyma07g33600.2 53 2e-07
Glyma07g33600.1 53 2e-07
Glyma02g14880.2 53 3e-07
Glyma02g14880.1 53 3e-07
Glyma07g33600.3 53 3e-07
Glyma04g14840.1 53 3e-07
Glyma06g47220.1 51 1e-06
Glyma08g24340.1 51 1e-06
Glyma03g00580.1 50 2e-06
Glyma15g35080.1 50 3e-06
Glyma19g30230.1 50 3e-06
>Glyma10g36820.1
Length = 181
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 97/183 (53%), Gaps = 17/183 (9%)
Query: 75 MMTLEDFLVXXXXXXXXXXXXXX-------------XMSMPLTERLSG--VFSLDGSSFQ 119
MMTLEDFL M MPLTERL +FS D
Sbjct: 1 MMTLEDFLAKADAVDDADHDHDHAHDHDPDYHNDDVKMPMPLTERLGSGTLFSFD--HLP 58
Query: 120 XXXXXXXXXXXXXXXXXXXXXXXXTRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRE 179
RGKR RPV+E LDKAAQQRQRRMIKNRESAARSRE
Sbjct: 59 TTPFHDPSEGSVIGFGNGVEVIECGRGKRSRPVLEQLDKAAQQRQRRMIKNRESAARSRE 118
Query: 180 RKQAYQVELESLAVXXXXXXXXXXXXXAERTKERFKQLMEEVIPVVEKRRPPRPLRRINS 239
RKQAYQVELESLAV AER K+R+KQLME+V+P+ +K++PP LRR S
Sbjct: 119 RKQAYQVELESLAVKLEEENDKLLKEKAERKKKRYKQLMEKVLPIAQKQKPPCILRRARS 178
Query: 240 MQW 242
+QW
Sbjct: 179 LQW 181
>Glyma08g19590.1
Length = 160
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 145 RGKRGRPVVENL--DKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXX 202
RGKR V E L DK Q+QRRMIKNRESAARSRERKQAY VELESL
Sbjct: 61 RGKRKTLVEEPLVVDKVTLQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAIL 120
Query: 203 XXXXAERTKERFKQLMEEVIPVVEKRRPPRPLRRINSMQW 242
A+R ++RF QLME +IPV EKR+P LRR+NS QW
Sbjct: 121 LKQEADRKRQRFNQLMECLIPVEEKRKPKPMLRRVNSSQW 160
>Glyma15g05440.1
Length = 130
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 151 PVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXAERT 210
P+V +DK Q+QRRMIKNRESAARSRERKQAY VELESL A+R
Sbjct: 41 PLV--VDKVTLQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAVLLQLAADRK 98
Query: 211 KERFKQLMEEVIPVVEKRRPPRPLRRINSMQW 242
+ R QLME +IPV EKR P R LRR+NS QW
Sbjct: 99 RLRLNQLMECLIPVEEKRIPKRMLRRVNSSQW 130
>Glyma08g08220.1
Length = 239
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 49 PRTVDDVWQEIIAGDH-----HQCKEEIPDEMMTLEDFLVXXXXXXXXXXXXXXXMSMPL 103
P++VDDVW +I+ G + D MTLEDFL
Sbjct: 51 PKSVDDVWNDIVTGATVHDAVSATTTDNADAAMTLEDFLTKAIREEDVRGAPPPPPPP-- 108
Query: 104 TERLSGVFSLDGSSFQXXXXXXXXXXXXXXXXXXXXXXXXTRGKRGRPVVENLDKAAQQR 163
F DGSS +GKR R V E +DKA Q+
Sbjct: 109 PPSSFLPFPADGSS--------SSVEPFANGVSAAPSNSVQKGKR-RAVEEPVDKATLQK 159
Query: 164 QRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXAERTKERFKQLMEEVIP 223
QRRMIKNRESAARSRERKQAY ELE L AE ++R KQL E +IP
Sbjct: 160 QRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENVQLLNEEAEMRRQRKKQLFECIIP 219
Query: 224 VVEKRRPPRPLRRINSMQ 241
+ +P + LRR+NS Q
Sbjct: 220 IEVMPKPKKKLRRVNSAQ 237
>Glyma05g25200.1
Length = 214
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 38 HADSTLTDPYVPRTVDDVWQEIIAGDHHQCKEEIPDEMMTLEDFLVXXXXXXXXXXXXXX 97
H L P +VDD W+ I A +TLEDFL
Sbjct: 38 HPMDDLLKSITPNSVDDFWKGIAAASTDNAG------GVTLEDFLTK------------- 78
Query: 98 XMSMPLTE---RLSGVFSLDGSSFQXXXXXXXXXXXXXXXXXXXXXXXXTRGKRGRPVVE 154
++P+TE R + F +GKR R V E
Sbjct: 79 --AIPVTEEDVRGAPPPPPSFLPFPAEGSSSSVEPFANNGVGSAPSNSVQKGKR-RAVEE 135
Query: 155 NLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXAERTKERF 214
+DKA Q+ RRMIKNRESAARSRERKQAY ELE L E +
Sbjct: 136 PVDKATLQKLRRMIKNRESAARSRERKQAYTSELEYLV----------HQLEQENARLLK 185
Query: 215 KQLMEEVIPVVEKRRPPRPLRRINSMQ 241
++L E +IP+ +P + LRR+NS Q
Sbjct: 186 EELFECIIPIEVMPKPKKKLRRVNSAQ 212
>Glyma05g25200.2
Length = 190
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 64/157 (40%), Gaps = 25/157 (15%)
Query: 38 HADSTLTDPYVPRTVDDVWQEIIAGDHHQCKEEIPDEMMTLEDFLVXXXXXXXXXXXXXX 97
H L P +VDD W+ I A +TLEDFL
Sbjct: 38 HPMDDLLKSITPNSVDDFWKGIAAASTDNAG------GVTLEDFLTK------------- 78
Query: 98 XMSMPLTE---RLSGVFSLDGSSFQXXXXXXXXXXXXXXXXXXXXXXXXTRGKRGRPVVE 154
++P+TE R + F +GKR R V E
Sbjct: 79 --AIPVTEEDVRGAPPPPPSFLPFPAEGSSSSVEPFANNGVGSAPSNSVQKGKR-RAVEE 135
Query: 155 NLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESL 191
+DKA Q+ RRMIKNRESAARSRERKQAY ELE L
Sbjct: 136 PVDKATLQKLRRMIKNRESAARSRERKQAYTSELEYL 172
>Glyma15g05440.2
Length = 119
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 39/50 (78%), Gaps = 4/50 (8%)
Query: 145 RGKRGRPVVEN---LDKAAQQRQRRMIKNRESAARSRERKQAYQVELESL 191
R KR + VVE +DK Q+QRRMIKNRESAARSRERKQAY VELESL
Sbjct: 31 RVKR-KSVVEEPLVVDKVTLQKQRRMIKNRESAARSRERKQAYTVELESL 79
>Glyma19g37910.1
Length = 387
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 146 GKRGRP-VVEN-LDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXX 203
G RGR VV+ ++K ++RQRRMIKNRESAARSR RKQAY VELE+
Sbjct: 284 GLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLK 343
Query: 204 XXXAERTKERFKQLMEEV 221
AE + R +Q EEV
Sbjct: 344 QALAELERGRKQQCFEEV 361
>Glyma06g04350.1
Length = 422
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 146 GKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
G RGR ++K ++RQRRMIKNRESAARSR RKQAY +ELE+
Sbjct: 328 GLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEA 372
>Glyma13g03880.3
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 38 HADSTLTDPYVPRTVDDVWQEIIAGDHHQCKEEIPD---EMM----TLEDFLVXXXXXXX 90
A TL +TVDDVW+EI G + E++ EM TLEDFLV
Sbjct: 86 QASLTLARALSGKTVDDVWREIQQGQKKRYGEDVKSQEGEMTLGETTLEDFLVQAGLFAE 145
Query: 91 XXXXXXXXMSMPLTERLSGVFSLDGSSFQXXXXXXXXXXXXXXXXXXXXXXXXTRGKRGR 150
G+ ++D S+ Q TR R R
Sbjct: 146 ASISPAV-----------GLDTMDSSAAQGFQQKTGLLSSPSIGSLSD-----TRPGRKR 189
Query: 151 PVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
+ +K ++R RR IKNRESAARSR RKQAY EL S
Sbjct: 190 DAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVS 229
>Glyma13g03880.1
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 38 HADSTLTDPYVPRTVDDVWQEIIAGDHHQCKEEIPD---EMM----TLEDFLVXXXXXXX 90
A TL +TVDDVW+EI G + E++ EM TLEDFLV
Sbjct: 86 QASLTLARALSGKTVDDVWREIQQGQKKRYGEDVKSQEGEMTLGETTLEDFLVQAGLFAE 145
Query: 91 XXXXXXXXMSMPLTERLSGVFSLDGSSFQXXXXXXXXXXXXXXXXXXXXXXXXTRGKRGR 150
G+ ++D S+ Q TR R R
Sbjct: 146 ASISPAV-----------GLDTMDSSAAQGFQQKTGLLSSPSIGSLSD-----TRPGRKR 189
Query: 151 PVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
+ +K ++R RR IKNRESAARSR RKQAY EL S
Sbjct: 190 DAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVS 229
>Glyma13g03880.2
Length = 266
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 38 HADSTLTDPYVPRTVDDVWQEIIAGDHHQCKEEIPD---EMM----TLEDFLVXXXXXXX 90
A TL +TVDDVW+EI G + E++ EM TLEDFLV
Sbjct: 86 QASLTLARALSGKTVDDVWREIQQGQKKRYGEDVKSQEGEMTLGETTLEDFLVQAGLFAE 145
Query: 91 XXXXXXXXMSMPLTERLSGVFSLDGSSFQXXXXXXXXXXXXXXXXXXXXXXXXTRGKRGR 150
G+ ++D S+ Q TR R R
Sbjct: 146 ASISPAV-----------GLDTMDSSAAQGFQQKTGLLSSPSIGSLSD-----TRPGRKR 189
Query: 151 PVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
+ +K ++R RR IKNRESAARSR RKQAY EL S
Sbjct: 190 DAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVS 229
>Glyma04g04170.1
Length = 417
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR ++K ++RQRRMIKNRESAARSR RKQAY +ELE+
Sbjct: 325 RGRKNGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEA 367
>Glyma10g08370.1
Length = 447
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
++K ++RQRRMIKNRESAARSR RKQAY VELE+
Sbjct: 355 VEKVVERRQRRMIKNRESAARSRARKQAYTVELEA 389
>Glyma07g33600.2
Length = 424
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 147 KRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR ++K ++RQRRMIKNRESAARSR RKQAY ELE+
Sbjct: 332 NRGRKFSA-IEKVVERRQRRMIKNRESAARSRARKQAYTFELEA 374
>Glyma07g33600.1
Length = 424
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 147 KRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR ++K ++RQRRMIKNRESAARSR RKQAY ELE+
Sbjct: 332 NRGRKFSA-IEKVVERRQRRMIKNRESAARSRARKQAYTFELEA 374
>Glyma02g14880.2
Length = 439
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
++K ++RQRRMIKNRESAARSR RKQAY ELE+
Sbjct: 355 IEKVVERRQRRMIKNRESAARSRARKQAYTFELEA 389
>Glyma02g14880.1
Length = 439
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
++K ++RQRRMIKNRESAARSR RKQAY ELE+
Sbjct: 355 IEKVVERRQRRMIKNRESAARSRARKQAYTFELEA 389
>Glyma07g33600.3
Length = 421
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 147 KRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR ++K ++RQRRMIKNRESAARSR RKQAY ELE+
Sbjct: 332 NRGRKFSA-IEKVVERRQRRMIKNRESAARSRARKQAYTFELEA 374
>Glyma04g14840.1
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 146 GKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELE 189
G+ G + ++K ++RQ+RMIKNRESAARSR RKQAY ELE
Sbjct: 201 GRNGGTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTTELE 244
>Glyma06g47220.1
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 145 RGKRGRPVVENL-DKAAQQRQRRMIKNRESAARSRERKQAYQVELE 189
R R R E++ +K ++RQ+RMIKNRESAARSR RKQAY ELE
Sbjct: 228 RPGRKRGTSEDMVEKTVERRQKRMIKNRESAARSRARKQAYTTELE 273
>Glyma08g24340.1
Length = 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 144 TRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
T G++ + ++K ++RQ+RMIKNRESAARSR RKQAY ELE+
Sbjct: 235 TPGRKKSTSEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELEN 281
>Glyma03g00580.1
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELE 189
++K ++RQ+RMIKNRESAARSR RKQAY ELE
Sbjct: 240 VEKTVERRQKRMIKNRESAARSRARKQAYTQELE 273
>Glyma15g35080.1
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 157 DKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXAERTKERFKQ 216
+K ++RQ+RMIKNRESAARSR RKQAY ELE+ E + R ++
Sbjct: 227 EKTVERRQKRMIKNRESAARSRARKQAYTNELEN----------KVSRLEEENERLRKQK 276
Query: 217 LMEEVIPVVEKRRPPRPLRRINS 239
+E ++P P LRRI S
Sbjct: 277 ELELMLPCEPPPEPKYQLRRIAS 299
>Glyma19g30230.1
Length = 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELE 189
++K ++RQ+RMIKNRESAARSR RKQAY ELE
Sbjct: 228 VEKIVERRQKRMIKNRESAARSRARKQAYTQELE 261