Miyakogusa Predicted Gene

Lj5g3v1914150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1914150.1 Non Chatacterized Hit- tr|J7I1Z2|J7I1Z2_ORYRU
Uncharacterized protein OS=Oryza rufipogon PE=4
SV=1,54.84,8e-17,seg,NULL,CUFF.56175.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g30950.1                                                       265   2e-71
Glyma10g36640.1                                                       261   2e-70
Glyma02g08720.1                                                       192   2e-49
Glyma16g27840.1                                                       168   3e-42

>Glyma20g30950.1 
          Length = 207

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/193 (71%), Positives = 149/193 (77%), Gaps = 4/193 (2%)

Query: 1   MLLAVEXXXXXXXXXXXXXXXXXXXXXXQRDEDKPMRVAPWNQYQLVDQESDPDPQLQLA 60
           MLLAVE                      QR+EDKPMRVAPWNQYQLVDQESDP  +LQLA
Sbjct: 1   MLLAVEGGGFFSASASGYTKGLSLLLLGQRNEDKPMRVAPWNQYQLVDQESDP--ELQLA 58

Query: 61  STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQPDVSPGPLVPTKGKDPSGNVXXXX 120
           STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQ DVSPG LV  KGKDPS +V    
Sbjct: 59  STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQHDVSPGTLVSNKGKDPSAHV--DD 116

Query: 121 XXNRRKVTLKSSIKRPQVNKSVPAEAANEHEPSGGRGVHNAGGQAERRKVQWTDSCGSEL 180
             + RKVTLKSSIK+PQ++K +P EAANEHE SGG+G+   GGQ ERRKVQWTD+CGSEL
Sbjct: 117 ESDNRKVTLKSSIKKPQISKPIPVEAANEHEASGGQGICTPGGQPERRKVQWTDNCGSEL 176

Query: 181 VEIREFEPSEGDG 193
           VEIREFEPSE DG
Sbjct: 177 VEIREFEPSEVDG 189


>Glyma10g36640.1 
          Length = 207

 Score =  261 bits (668), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/193 (71%), Positives = 146/193 (75%), Gaps = 4/193 (2%)

Query: 1   MLLAVEXXXXXXXXXXXXXXXXXXXXXXQRDEDKPMRVAPWNQYQLVDQESDPDPQLQLA 60
           MLLAVE                      QR+EDKPMRVAPWNQYQLVDQESDP  +LQLA
Sbjct: 1   MLLAVEGGGFFSASASGYTKGLSLLLLGQRNEDKPMRVAPWNQYQLVDQESDP--ELQLA 58

Query: 61  STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQPDVSPGPLVPTKGKDPSGNVXXXX 120
           STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQ DVSPGPLV  KGKDPS +V    
Sbjct: 59  STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQHDVSPGPLVSNKGKDPSAHV--DD 116

Query: 121 XXNRRKVTLKSSIKRPQVNKSVPAEAANEHEPSGGRGVHNAGGQAERRKVQWTDSCGSEL 180
             + RK TLKSSIK+PQ  KSVP E ANEHE S G+G+   GGQ ERRKVQWTD+CGSEL
Sbjct: 117 ESDNRKATLKSSIKKPQNRKSVPVEVANEHEASSGQGICTPGGQPERRKVQWTDNCGSEL 176

Query: 181 VEIREFEPSEGDG 193
           VEIREFEPSE DG
Sbjct: 177 VEIREFEPSEVDG 189


>Glyma02g08720.1 
          Length = 194

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/193 (55%), Positives = 118/193 (61%), Gaps = 17/193 (8%)

Query: 1   MLLAVEXXXXXXXXXXXXXXXXXXXXXXQRDEDKPMRVAPWNQYQLVDQESDPDPQLQLA 60
           MLL VE                      QR +DK MRV PWNQ+ L  QESD   +LQLA
Sbjct: 1   MLLTVEGGGFFSSSASGYTKGLALLLLGQRSDDKSMRVLPWNQFHL-GQESDH--ELQLA 57

Query: 61  STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQPDVSPGPLVPTKGKDPSGNVXXXX 120
           S KNR+S GCASFVCFGR SAG DT S LKVGPA+  DVS G LV  KGK PS NV    
Sbjct: 58  SRKNRVSSGCASFVCFGRVSAGFDTTSHLKVGPAKHHDVSSGTLVSNKGKYPSANV---- 113

Query: 121 XXNRRKVTLKSSIKRPQVNKSVPAEAANEHEPSGGRGVHNAGGQAERRKVQWTDSCGSEL 180
             + RKV LKSS+KR Q  K  P EAA EHE S G           +RKVQWTD+CGSEL
Sbjct: 114 NDDSRKVALKSSLKRKQNKKPAPVEAATEHEASSG----------GKRKVQWTDTCGSEL 163

Query: 181 VEIREFEPSEGDG 193
           VEIREFEPS+ DG
Sbjct: 164 VEIREFEPSDADG 176


>Glyma16g27840.1 
          Length = 171

 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/177 (53%), Positives = 106/177 (59%), Gaps = 7/177 (3%)

Query: 1   MLLAVEXXXXXXXXXXXXXXXXXXXXXXQRDEDKPMRVAPWNQYQLVDQESDPDPQLQLA 60
           MLL VE                      QR +DKPMRV PWNQ+QLV QESD   +LQLA
Sbjct: 1   MLLTVEGGGFFSSSASGYSKGLTLLLLGQRSDDKPMRVLPWNQFQLVGQESDH--ELQLA 58

Query: 61  STKNRLSRGCASFVCFGRTSAGLDTPSPLKVGPAQQPDVSPGPLVPTKGKDPSGNVXXXX 120
           S KN +S GC SFVCFG  SAGLDT S LK+GPA+  DVS   LV  KGK P  N     
Sbjct: 59  SRKNCISSGCTSFVCFGHASAGLDTTSNLKLGPAKHHDVSSDTLVSHKGKYPCANA---- 114

Query: 121 XXNRRKVTLKSSIKRPQVNKSVPAEAANEHEPSGGRGVHNAGGQAERRKVQWTDSCG 177
             N RKV LKSS+KR +  K  P E   EHE  GG+G ++  GQ ERRKVQWTD+CG
Sbjct: 115 NDNSRKVALKSSLKRKENKKPAPVETVTEHEAPGGKG-NDFPGQTERRKVQWTDTCG 170