Miyakogusa Predicted Gene

Lj5g3v1903720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1903720.1 Non Chatacterized Hit- tr|F6HDR8|F6HDR8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.74,1e-17,seg,NULL; Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin,Bifunctional inhibit,CUFF.56146.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g03360.1                                                        82   2e-16

>Glyma10g03360.1 
          Length = 186

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 47/77 (61%)

Query: 1  MTYRGFALCLVMVMVATMWTQNAAQSGCTSALTSLSPCLNYITGXXXXXXXXXXXXXXXX 60
          M +RGFALCLV V+VATMW+QNAAQSGCT+ LTSLSPCLNYI G                
Sbjct: 1  MAFRGFALCLVAVIVATMWSQNAAQSGCTNTLTSLSPCLNYIMGSSSTPSASCCSQLSSI 60

Query: 61 XXXXXXXXXXLLNGGGS 77
                    +LNGGGS
Sbjct: 61 VQSSPQCLCSVLNGGGS 77