Miyakogusa Predicted Gene

Lj5g3v1889490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889490.1 Non Chatacterized Hit- tr|G7KHN4|G7KHN4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.64,1e-18,seg,NULL,CUFF.56114.1
         (170 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27590.1                                                       215   2e-56
Glyma02g08460.1                                                       101   5e-22
Glyma20g04250.1                                                        65   2e-11

>Glyma16g27590.1 
          Length = 192

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/152 (67%), Positives = 124/152 (81%), Gaps = 2/152 (1%)

Query: 20  VEIHLFRQGRGPIAVFKSQLGGSERDRLEVR-DILHHHFLKSIFAFNPQSG-RAAPIRFN 77
            EIHL+RQG+GP+AVFKS LGG E+D+LE+R DIL  + +KS+FAFNP +G R  P+RFN
Sbjct: 40  AEIHLYRQGKGPVAVFKSALGGWEQDQLEIREDILEKYGMKSVFAFNPTAGGRGVPVRFN 99

Query: 78  PKDGTSVLPYRHGAVLYIDAEPKDSLLKPVTRILVGVLLITIMIMLVWKDIPEWIKNFNV 137
           P++G S+L YR GAV+Y+D EPKDSL+KPVTRILVGV LIT MI LV +D P W+K  N 
Sbjct: 100 PRNGRSILTYRDGAVVYLDGEPKDSLVKPVTRILVGVALITFMITLVSRDTPNWLKKLNF 159

Query: 138 SGVNFSPWIVACVVIVFTRMRKRTKGFLKNFG 169
           SGVNF PWI+ACVVIVFTRMRKRT+ FLK  G
Sbjct: 160 SGVNFPPWILACVVIVFTRMRKRTRDFLKKRG 191


>Glyma02g08460.1 
          Length = 70

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 56/68 (82%)

Query: 100 KDSLLKPVTRILVGVLLITIMIMLVWKDIPEWIKNFNVSGVNFSPWIVACVVIVFTRMRK 159
           +DSL+KPVTRILVGV LIT MI LV +D P+W+K  N SGVNF PWI+ACVVIVFTR RK
Sbjct: 1   QDSLVKPVTRILVGVALITFMITLVSRDTPDWLKKLNFSGVNFPPWILACVVIVFTRTRK 60

Query: 160 RTKGFLKN 167
           RT+ FLK 
Sbjct: 61  RTRDFLKK 68


>Glyma20g04250.1 
          Length = 87

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)

Query: 20 VEIHLFRQGRGPIAVFKSQLGGSERDRLEVR-DILHHHFLKSIFAFNP 66
           EIHL+RQG+GP+AVFKS LG  E+D+LE R DIL  H +K +FAFNP
Sbjct: 36 AEIHLYRQGKGPMAVFKSALGDWEQDQLEFREDILEKHDMKLVFAFNP 83