Miyakogusa Predicted Gene

Lj5g3v1889420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889420.1 tr|A9RC27|A9RC27_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,42.48,3e-19,HSP20-like chaperones,HSP20-like chaperone;
CS,CS-like domain; CS,CS domain; no description,NULL; TE,CUFF.56191.1
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27570.1                                                       191   3e-49
Glyma16g27570.2                                                       190   6e-49
Glyma02g08440.1                                                       176   1e-44
Glyma19g39800.1                                                       108   4e-24
Glyma03g37190.1                                                        94   1e-19
Glyma05g10890.1                                                        89   4e-18
Glyma17g24150.1                                                        85   5e-17
Glyma17g24150.2                                                        67   1e-11

>Glyma16g27570.1 
          Length = 189

 Score =  191 bits (486), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/191 (54%), Positives = 115/191 (60%), Gaps = 4/191 (2%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSRHP VKWAQ SD LY+T+ELPDAQDVKL LEPEGK YFSATAG E IPYE + DLFDK
Sbjct: 1   MSRHPSVKWAQTSDVLYLTVELPDAQDVKLKLEPEGKFYFSATAGAEKIPYEVDIDLFDK 60

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFLXXXXXXXXXXXXXXXXXXP 120
           +DVNNS++SV  RNI YL+ KAE+K WDRLLKQGGK PVFL                   
Sbjct: 61  IDVNNSKASVGSRNICYLVKKAENKWWDRLLKQGGKSPVFLKVDWDKWVDEDEEQDNK-- 118

Query: 121 GPGA-DMDFGDFDFSNLNMXXXXXXXXXXXXXXXXXXXXXXXXVTGQASADNEPDSKGAV 179
            P A DMDFGD DFS L M                           +ASA  E D+K AV
Sbjct: 119 -PAASDMDFGDIDFSKLGMGGGEGLDSDAAGNDDADESDTEEEFVAEASASKEQDTKDAV 177

Query: 180 SSNPSVEPDAK 190
           SS+    PD K
Sbjct: 178 SSDAKDAPDTK 188


>Glyma16g27570.2 
          Length = 187

 Score =  190 bits (483), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 102/190 (53%), Positives = 114/190 (60%), Gaps = 4/190 (2%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSRHP VKWAQ SD LY+T+ELPDAQDVKL LEPEGK YFSATAG E IPYE + DLFDK
Sbjct: 1   MSRHPSVKWAQTSDVLYLTVELPDAQDVKLKLEPEGKFYFSATAGAEKIPYEVDIDLFDK 60

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFLXXXXXXXXXXXXXXXXXXP 120
           +DVNNS++SV  RNI YL+ KAE+K WDRLLKQGGK PVFL                   
Sbjct: 61  IDVNNSKASVGSRNICYLVKKAENKWWDRLLKQGGKSPVFLKVDWDKWVDEDEEQDNKP- 119

Query: 121 GPGADMDFGDFDFSNLNMXXXXXXXXXXXXXXXXXXXXXXXXVTGQASADNEPDSKGAVS 180
              +DMDFGD DFS L M                           +ASA  E D+K AVS
Sbjct: 120 ---SDMDFGDIDFSKLGMGGGEGLDSDAAGNDDADESDTEEEFVAEASASKEQDTKDAVS 176

Query: 181 SNPSVEPDAK 190
           S+    PD K
Sbjct: 177 SDAKDAPDTK 186


>Glyma02g08440.1 
          Length = 191

 Score =  176 bits (446), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/183 (54%), Positives = 112/183 (61%), Gaps = 2/183 (1%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSRHP VKWAQ SD LY+T+ELPDAQDVKL LEPEGK YFSATAG E IPYE + DLFDK
Sbjct: 1   MSRHPSVKWAQTSDVLYLTVELPDAQDVKLKLEPEGKFYFSATAGAEKIPYEVDIDLFDK 60

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFLXXXXXXXXXXXXXXXXXXP 120
           +DVNNS++SV  R+I YL+ KAE+K WDRLLKQGGK PVFL                   
Sbjct: 61  IDVNNSKASVGSRHICYLVKKAENKWWDRLLKQGGKSPVFLKVDWDKWVDEDEEQDNKP- 119

Query: 121 GPGADMDFGDFDFSNLNMXXXXXXXXXXXXXXXXXXXXXXXXVTGQASADNEPDSKGAVS 180
              +DMDFGD DFS ++M                           +ASA  E DSK AVS
Sbjct: 120 -AASDMDFGDIDFSKMSMGGGEGLDFDAAGNDDDDESDTEEEFAAEASASKEQDSKDAVS 178

Query: 181 SNP 183
           S P
Sbjct: 179 SYP 181


>Glyma19g39800.1 
          Length = 200

 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 70/101 (69%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSRHP VKWAQR D++YIT++L D+++ K+ L P+G   FS +AG E+  YE   +LFDK
Sbjct: 1   MSRHPEVKWAQRLDKVYITVQLADSKNAKVDLTPDGIFTFSGSAGAEDHQYELKLELFDK 60

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           V+V  S+ +V  R+I  ++ KAE   W RLL+  GKPP ++
Sbjct: 61  VNVEESKINVGVRSIFCVVQKAEDGWWKRLLRGEGKPPHYV 101


>Glyma03g37190.1 
          Length = 194

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 61/87 (70%)

Query: 1  MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
          MSRHP VKWAQR D++YIT++L D+++ K+ L P+G   FS +AG E+  YE   +LFDK
Sbjct: 1  MSRHPEVKWAQRLDKVYITVQLADSKNAKVDLTPDGIFTFSGSAGAEDHQYELKLELFDK 60

Query: 61 VDVNNSESSVSKRNIIYLISKAESKCW 87
          V+V  S+ +V +R+I  ++ KAE   W
Sbjct: 61 VNVEESKINVGERSIFIVVQKAEDGWW 87


>Glyma05g10890.1 
          Length = 129

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 1/101 (0%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSRHP V WAQRSD++Y+T+ LPDA+DV +  EP+G   FSA+ G ++  Y F+ +L+  
Sbjct: 1   MSRHPEVLWAQRSDKVYLTVALPDAKDVFVKCEPQGLFAFSAS-GVQDKAYSFSLELYGS 59

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           ++    ++    RNI+  I K E   W RLLK   KP  +L
Sbjct: 60  IEPEGCKTKSGLRNILCSIQKGEKGWWKRLLKSEEKPAPYL 100


>Glyma17g24150.1 
          Length = 151

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSR+P V WAQRSD++Y+T+ LPDA++V +  EP+G   FSA+ G +   Y F+ +L+  
Sbjct: 1   MSRYPEVLWAQRSDKVYLTVALPDAKNVSVKCEPQGLFTFSAS-GVQEEAYSFSLELYGC 59

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           ++    ++    RNI+  I K E   W RLLK   KP  +L
Sbjct: 60  IEPEGCKTKSGLRNILCSIQKGEKGWWKRLLKSEEKPAPYL 100


>Glyma17g24150.2 
          Length = 135

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 17/101 (16%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSR+P V WAQRSD++Y+T+ LPDA++V +  EP+G   FSA+ G +   Y F+ +L+  
Sbjct: 1   MSRYPEVLWAQRSDKVYLTVALPDAKNVSVKCEPQGLFTFSAS-GVQEEAYSFSLELYGC 59

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           ++                  K E   W RLLK   KP  +L
Sbjct: 60  IEPE----------------KGEKGWWKRLLKSEEKPAPYL 84