Miyakogusa Predicted Gene

Lj5g3v1864570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1864570.1 Non Chatacterized Hit- tr|B9RNB4|B9RNB4_RICCO
Transcription factor, putative OS=Ricinus communis
GN=,60,1e-16,seg,NULL; HLH,Helix-loop-helix domain,CUFF.56076.1
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g31500.1                                                       139   6e-34
Glyma10g36110.1                                                       139   7e-34
Glyma02g45640.1                                                        52   1e-07
Glyma14g03180.1                                                        51   2e-07
Glyma19g41580.1                                                        49   1e-06
Glyma03g39010.1                                                        47   4e-06

>Glyma20g31500.1 
          Length = 127

 Score =  139 bits (350), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 78/127 (61%), Positives = 90/127 (70%), Gaps = 8/127 (6%)

Query: 1   MGISSHPSFVPLSLKDLLQGTEESR-NPSYGYXXXXXXXXXXXX------XXRRPRGILM 53
           MGISS PS V  SLKDL+QGTEE++ + SYG                     RRPR ILM
Sbjct: 1   MGISSQPSLVSFSLKDLIQGTEENKTSSSYGCLWSKVLTAQAKKVKGTKRSVRRPRRILM 60

Query: 54  KRRRGGNRRGTV-AIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVD 112
             RR G+RRG+   I++RVRTLK LVPNSDS+GLDGLFR+TADYIL+LQTRVRVMQVMV 
Sbjct: 61  MNRRSGSRRGSYNGIRRRVRTLKSLVPNSDSLGLDGLFRQTADYILSLQTRVRVMQVMVK 120

Query: 113 VLTGYDD 119
           VLTG D+
Sbjct: 121 VLTGSDE 127


>Glyma10g36110.1 
          Length = 128

 Score =  139 bits (350), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 79/127 (62%), Positives = 90/127 (70%), Gaps = 8/127 (6%)

Query: 1   MGISSHPSFVPLSLKDLLQGTEESR-NPSYGYXXXXXXXXXXXX------XXRRPRGILM 53
           MGISS PS V LSLKDL+QGTEE+R + SYG                     RRPR ILM
Sbjct: 1   MGISSQPSLVSLSLKDLIQGTEENRTSSSYGCLRSKALAAQAKKVKGTKRSVRRPRRILM 60

Query: 54  KRRRGGNRRGTV-AIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVD 112
            +RR G+RRG+   I++RVR LK LVPNSDS+ LDGLFR+TADYIL+LQTRVRVMQVMV 
Sbjct: 61  MKRRSGSRRGSNNGIRRRVRKLKSLVPNSDSLELDGLFRDTADYILSLQTRVRVMQVMVK 120

Query: 113 VLTGYDD 119
           VLTG DD
Sbjct: 121 VLTGSDD 127


>Glyma02g45640.1 
          Length = 129

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 4/53 (7%)

Query: 67  IQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYDD 119
           I++++  L+R+VP  +S+G+D LF ETA YILALQ +V+ ++     LTG+ D
Sbjct: 70  IERKIHALQRIVPGGESLGVDKLFDETAGYILALQYQVKALR----ALTGFFD 118


>Glyma14g03180.1 
          Length = 139

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 4/51 (7%)

Query: 67  IQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGY 117
           I++++  L+R+VP  +S+G+D LF ETA YILALQ +V+ ++     LTG+
Sbjct: 80  IERKIHALQRIVPGGESLGVDKLFDETAGYILALQYQVKALR----ALTGF 126


>Glyma19g41580.1 
          Length = 182

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 52  LMKRRRGGNRRGTVAIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMV 111
            MK+     RR   A+QK+ R L +L+P    +    L  E  DYI AL+ +VR M+ + 
Sbjct: 107 FMKKTTPEIRRSLPAVQKKARVLGKLIPGCRKVSFPKLLEEAGDYISALEMQVRAMKALA 166

Query: 112 DVLT 115
           D+L 
Sbjct: 167 DLLA 170


>Glyma03g39010.1 
          Length = 194

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 34/63 (53%)

Query: 52  LMKRRRGGNRRGTVAIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMV 111
            MK+     RR   A+QK+ R L +L+P    +    L  E  DYI AL+ +VR M+ + 
Sbjct: 119 CMKKTTPDIRRRLPAVQKKARVLGKLIPGCRKVSFPKLLEEAGDYISALEMQVRAMKALA 178

Query: 112 DVL 114
           D+L
Sbjct: 179 DLL 181