Miyakogusa Predicted Gene

Lj5g3v1864530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1864530.1 Non Chatacterized Hit- tr|B9RZ99|B9RZ99_RICCO 50S
ribosomal protein L21, mitochondrial, putative OS=,44.93,2e-18,50S
RIBOSOMAL PROTEIN L21,Ribosomal protein L21; seg,NULL;
Ribosomal_L21,Ribosomal protein L21; Ribo,CUFF.56086.1
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g36070.1                                                       279   2e-75
Glyma20g31530.1                                                       269   1e-72
Glyma07g31650.1                                                        83   3e-16
Glyma13g24790.1                                                        82   3e-16
Glyma13g02300.1                                                        72   3e-13

>Glyma10g36070.1 
          Length = 213

 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 144/214 (67%), Positives = 161/214 (75%), Gaps = 8/214 (3%)

Query: 1   MASATAIVSTLCASFGTHCTITSTSKPLFSQT-SHSRFPTHSNKLSLQXXXXXXXXXXXX 59
           MA+AT  +STLCA+FGTHC I+   KPLFSQ  S +RFP+ S KL+L             
Sbjct: 1   MATATVSISTLCATFGTHCAISHDPKPLFSQPFSLNRFPSTSYKLTLSPRSPISTLP--- 57

Query: 60  XXKVSESAVAELETDVTTPQPEAGEIVPAQPPSWEPGLFAVVMVGGRQYIVHPGRWIVVQ 119
             KVSESAVAE ET  + P+P+  +IVPAQPPSWEPGLFAVVM+GGRQYIVHPGR + VQ
Sbjct: 58  --KVSESAVAETETGSSEPEPD--QIVPAQPPSWEPGLFAVVMIGGRQYIVHPGRHLTVQ 113

Query: 120 RLKGAKANDKIALQKVLLVGTDTSCYIGKPIVSNAVVYATVEEQGFDPKVIVFXXXXXXX 179
           RLKGA  NDKIAL KVLLVGTDTSCYIGKPIV+NAVVYATVEEQG DPKVIVF       
Sbjct: 114 RLKGANVNDKIALHKVLLVGTDTSCYIGKPIVTNAVVYATVEEQGLDPKVIVFKYKKKKH 173

Query: 180 XXXXXXXXQPHTRLRINSIMGYENYPKVTMDDVK 213
                   QP+TR+RINSIMGYENYPKVTMDD+K
Sbjct: 174 YRRNIGHRQPNTRIRINSIMGYENYPKVTMDDIK 207


>Glyma20g31530.1 
          Length = 213

 Score =  269 bits (688), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/214 (64%), Positives = 157/214 (73%), Gaps = 8/214 (3%)

Query: 1   MASATAIVSTLCASFGTHCTITSTSKPLFSQTSH-SRFPTHSNKLSLQXXXXXXXXXXXX 59
           MA+AT  +STLCA+FGTHC I+   KPLFSQ  + + FP++S KL+              
Sbjct: 1   MATATVSISTLCATFGTHCAISHNPKPLFSQPFNLNHFPSNSYKLAFSPRSPLSPLP--- 57

Query: 60  XXKVSESAVAELETDVTTPQPEAGEIVPAQPPSWEPGLFAVVMVGGRQYIVHPGRWIVVQ 119
             K SESAVAE  T+  + +PE  +I PAQPPSWEPGLFAVVM+GGRQYIVHPGR + VQ
Sbjct: 58  --KASESAVAE--TEPGSAEPEPAQISPAQPPSWEPGLFAVVMIGGRQYIVHPGRHLTVQ 113

Query: 120 RLKGAKANDKIALQKVLLVGTDTSCYIGKPIVSNAVVYATVEEQGFDPKVIVFXXXXXXX 179
           RLKGA  NDKIAL KVLLVGTDTSCYIGKPIV+NAVVYATVEEQG DPKVIVF       
Sbjct: 114 RLKGANVNDKIALHKVLLVGTDTSCYIGKPIVTNAVVYATVEEQGLDPKVIVFKYKKKKH 173

Query: 180 XXXXXXXXQPHTRLRINSIMGYENYPKVTMDDVK 213
                   QP+TR+RINSIMGYENYPKVTMDD+K
Sbjct: 174 YRRNIGHRQPNTRIRINSIMGYENYPKVTMDDIK 207


>Glyma07g31650.1 
          Length = 262

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 93  WEPGLFAVVMVGGRQYIVHPGRWIVVQRLKGAKANDKIALQKVLLVGTDTSCYIGKPIVS 152
           +EP +FAVV +G  Q+ V     I  +RLK  + NDK+ L KVLL+G+ +   +G+PIV 
Sbjct: 129 YEP-VFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKLILNKVLLLGSASQTIVGRPIVP 187

Query: 153 NAVVYATVEEQGFDPKVIVFXXXXXXXXXXXXXXXQPHTRLRINSIMGYEN 203
           +A V+A VEE   D KVI+F               Q  T+LRI  I G E 
Sbjct: 188 DAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITDIQGIEK 238


>Glyma13g24790.1 
          Length = 267

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 93  WEPGLFAVVMVGGRQYIVHPGRWIVVQRLKGAKANDKIALQKVLLVGTDTSCYIGKPIVS 152
           +EP +FAVV +G  Q+ V     I  +RLK  + NDK+ L KVLL+G+ +   IG+PIV 
Sbjct: 134 YEP-VFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKLILNKVLLLGSASQTIIGRPIVP 192

Query: 153 NAVVYATVEEQGFDPKVIVFXXXXXXXXXXXXXXXQPHTRLRINSIMGYEN 203
           +A V+A VEE   D KVI+F               Q  T+LRI  I G E 
Sbjct: 193 DAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITDIQGIEK 243


>Glyma13g02300.1 
          Length = 57

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 38/44 (86%)

Query: 129 KIALQKVLLVGTDTSCYIGKPIVSNAVVYATVEEQGFDPKVIVF 172
           +IAL KVLLV T+T CYIGKPIV+N VVYA VEEQG DPKVIVF
Sbjct: 1   QIALHKVLLVATNTFCYIGKPIVTNVVVYAIVEEQGLDPKVIVF 44