Miyakogusa Predicted Gene
- Lj5g3v1853140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1853140.1 tr|I2FN51|I2FN51_USTHO Related to
spliceosome-associated protein SAP-49 OS=Ustilago hordei PE=4
SV=1,39.77,0.000000000000001,RNA-binding domain, RBD,NULL; RRM_1,RNA
recognition motif domain; SUBFAMILY NOT NAMED,NULL; FAMILY
N,CUFF.56057.1
(196 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g35900.1 306 1e-83
Glyma10g35900.3 255 2e-68
Glyma10g35900.2 255 2e-68
Glyma20g31720.1 253 9e-68
Glyma20g31720.2 165 3e-41
Glyma09g00310.1 77 9e-15
Glyma12g36950.1 77 9e-15
Glyma09g00290.1 74 1e-13
Glyma20g31220.1 52 5e-07
Glyma20g31220.2 52 5e-07
Glyma10g36350.1 52 6e-07
Glyma17g35890.1 51 1e-06
Glyma10g41320.1 50 1e-06
Glyma07g33860.2 47 1e-05
>Glyma10g35900.1
Length = 186
Score = 306 bits (783), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/175 (85%), Positives = 160/175 (91%)
Query: 1 MSDNSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEV 60
MS NS CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEE+
Sbjct: 1 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60
Query: 61 ADYAVRLFSGLVTLYNRTLKFAISGKDKTTPNGSTANTPSSNSSQRPRLNPVPIYNSENF 120
ADYAVRLFSGL+TLYNRTLKFAISG+DKTT NGSTA TP+SNSSQRPR PV I NSENF
Sbjct: 61 ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSENF 120
Query: 121 QHSARLSTPERFSDYAVNHSQVPPHRLSGQSSGYGTHYGSNNYEYSRRALGATLD 175
QHSARLSTP+RFSD+ VN+SQV P R++ QSSGYG+HY NNYEYSRRA GATLD
Sbjct: 121 QHSARLSTPDRFSDHPVNYSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLD 175
>Glyma10g35900.3
Length = 148
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/141 (88%), Positives = 132/141 (93%)
Query: 1 MSDNSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEV 60
MS NS CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEE+
Sbjct: 1 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60
Query: 61 ADYAVRLFSGLVTLYNRTLKFAISGKDKTTPNGSTANTPSSNSSQRPRLNPVPIYNSENF 120
ADYAVRLFSGL+TLYNRTLKFAISG+DKTT NGSTA TP+SNSSQRPR PV I NSENF
Sbjct: 61 ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSENF 120
Query: 121 QHSARLSTPERFSDYAVNHSQ 141
QHSARLSTP+RFSD+ VN+SQ
Sbjct: 121 QHSARLSTPDRFSDHPVNYSQ 141
>Glyma10g35900.2
Length = 142
Score = 255 bits (651), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/141 (88%), Positives = 132/141 (93%)
Query: 1 MSDNSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEV 60
MS NS CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEE+
Sbjct: 1 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60
Query: 61 ADYAVRLFSGLVTLYNRTLKFAISGKDKTTPNGSTANTPSSNSSQRPRLNPVPIYNSENF 120
ADYAVRLFSGL+TLYNRTLKFAISG+DKTT NGSTA TP+SNSSQRPR PV I NSENF
Sbjct: 61 ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSENF 120
Query: 121 QHSARLSTPERFSDYAVNHSQ 141
QHSARLSTP+RFSD+ VN+SQ
Sbjct: 121 QHSARLSTPDRFSDHPVNYSQ 141
>Glyma20g31720.1
Length = 164
Score = 253 bits (646), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 124/141 (87%), Positives = 130/141 (92%)
Query: 1 MSDNSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEV 60
MS NS CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEE+
Sbjct: 1 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60
Query: 61 ADYAVRLFSGLVTLYNRTLKFAISGKDKTTPNGSTANTPSSNSSQRPRLNPVPIYNSENF 120
ADYAVRLFSGL+TLYNRTLKFAISG+DKTT NGSTA P+ NSSQRPR PVPI NSENF
Sbjct: 61 ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAIAPTLNSSQRPRPYPVPINNSENF 120
Query: 121 QHSARLSTPERFSDYAVNHSQ 141
QH ARLSTP+RFSDY VN+SQ
Sbjct: 121 QHPARLSTPDRFSDYPVNNSQ 141
>Glyma20g31720.2
Length = 114
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/83 (93%), Positives = 81/83 (97%)
Query: 1 MSDNSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEV 60
MS NS CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEE+
Sbjct: 1 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60
Query: 61 ADYAVRLFSGLVTLYNRTLKFAI 83
ADYAVRLFSGL+TLYNRTLKFA+
Sbjct: 61 ADYAVRLFSGLITLYNRTLKFAM 83
>Glyma09g00310.1
Length = 397
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 4 NSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADY 63
N + Y+GNLD ++++ +L+++ +QAG VV++++PKD+ + + +G+ F E+ +EE ADY
Sbjct: 22 NQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADY 81
Query: 64 AVRLFSGLVTLYNRTLKFAISGKDKTT 90
A+++ + ++ LY + ++ + +DK +
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 SDNSGCSVYIGNLDERVTDRVLYDILIQAGRVV-DLHIPKDKESEKPKGFAFAEYETEEV 60
S + G +++IGNLD V +++LYD G +V + I +D ++ +GF F Y++ E
Sbjct: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
Query: 61 ADYAVRLFSGLVTLYNRTLKFAISGKDKTTPNGSTANTPS 100
+D A+ +G L NR + + + K T G TP+
Sbjct: 167 SDSAIEAMNGQY-LCNRQITVSYAYKKDT--KGERHGTPA 203
>Glyma12g36950.1
Length = 364
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 4 NSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADY 63
N + Y+GNLD ++ + +L+++ +QAG VV++++PKD+ + + +G+ F E+ +EE ADY
Sbjct: 22 NQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADY 81
Query: 64 AVRLFSGLVTLYNRTLKFAISGKDKTT 90
A+++ + ++ LY + ++ + +DK +
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 SDNSGCSVYIGNLDERVTDRVLYDILIQAGRVV-DLHIPKDKESEKPKGFAFAEYETEEV 60
S + G +++IGNLD V +++LYD G +V + I +D E+ +GF F Y++ E
Sbjct: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEA 166
Query: 61 ADYAVRLFSGLVTLYNRTLKFAISGKDKTTPNGSTANTPS 100
+D A+ +G L NR + + + K T G TP+
Sbjct: 167 SDSAIEAMNGQY-LCNRQITVSYAYKKDT--KGERHGTPA 203
>Glyma09g00290.1
Length = 417
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 4 NSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADY 63
N + Y+GNLD ++++ +L+++ +QAG VV++++PKD+ + + +G+ F E+ +EE ADY
Sbjct: 22 NQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADY 81
Query: 64 AVRLFSGLVTLYNRTLKFAISGKDK 88
A+++ + ++ LY + ++ + +DK
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDK 105
>Glyma20g31220.1
Length = 552
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 9 VYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADYAVRLF 68
V++GN+ T+ L +I + G VV + D+E+ KPKG+ F EY+ EE A A R
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 69 SGLVTLYNRTLKFAIS----GKDKTTPNGSTANTPSSNSSQRPRLNPVPIYNSENFQH 122
G + R L+ + G D+ G ++N + ++ VP + E QH
Sbjct: 71 QG-YEINGRQLRVDFAENDKGNDRNREQGRGGPGMTTNVDHQKQVG-VPAVHGEAVQH 126
>Glyma20g31220.2
Length = 544
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 9 VYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADYAVRLF 68
V++GN+ T+ L +I + G VV + D+E+ KPKG+ F EY+ EE A A R
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 69 SGLVTLYNRTLKFAIS----GKDKTTPNGSTANTPSSNSSQRPRLNPVPIYNSENFQH 122
G + R L+ + G D+ G ++N + ++ VP + E QH
Sbjct: 71 QG-YEINGRQLRVDFAENDKGNDRNREQGRGGPGMTTNVDHQKQVG-VPAVHGEAVQH 126
>Glyma10g36350.1
Length = 545
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 9 VYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADYAVRLF 68
V++GN+ T+ L +I + G VV + D+E+ KPKG+ F EY+ EE A A R
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 69 SGLVTLYNRTLKFAISGKDK 88
G + R L+ + DK
Sbjct: 71 QG-YEINGRQLRVDFAENDK 89
>Glyma17g35890.1
Length = 654
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 8 SVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADYAVRL 67
S+Y+G+LD+ V D LYD+ Q G+VV + + +D + + G+ + + + A A+ +
Sbjct: 36 SLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDV 95
Query: 68 FSGLVTLYNRTLKFAISGKDKTTPNGSTAN 97
+ L NR+++ S +D + TAN
Sbjct: 96 LN-FTPLNNRSIRIMYSHRDPSLRKSGTAN 124
>Glyma10g41320.1
Length = 191
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 3 DNSGCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVAD 62
+N G ++Y+ L R+TD L+ + G+VVD H+ KD +++ +GF F ET + A+
Sbjct: 42 ENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMETNDDAE 101
Query: 63 YAVR-----LFSG-LVTL 74
++ +F G L+T+
Sbjct: 102 CCIKYLNRSVFEGRLITV 119
>Glyma07g33860.2
Length = 515
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 8 SVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEVADYAVRL 67
S+Y+G+LD VTD LYD+ Q G+VV + + +D S + G+ + + + A A+ +
Sbjct: 32 SLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDV 91
Query: 68 FSGLVTLYNRTLKFAISGKD 87
+ L NR ++ S +D
Sbjct: 92 LN-FTPLNNRPIRIMYSHRD 110