Miyakogusa Predicted Gene

Lj5g3v1853110.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1853110.1 Non Chatacterized Hit- tr|D8S013|D8S013_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,41.67,0.000000000000001,Glu-tRNAGln amidotransferase C
subunit,NULL; SUBFAMILY NOT NAMED,NULL; FROUNT PROTEIN-RELATED,NULL;
,CUFF.56067.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g31750.1                                                       185   2e-47
Glyma20g31750.2                                                       108   2e-24

>Glyma20g31750.1 
          Length = 143

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/121 (76%), Positives = 104/121 (85%), Gaps = 4/121 (3%)

Query: 22  FAKVSSVGLHNK---FRSFSSTTICSSTQPPDLTSLAKKAQISLTPHQVDEFAPKIQQVI 78
           F KV+ V +H K   F+SFSSTT CSS  PPDL  LAK AQISLTP++V+E APKIQQVI
Sbjct: 24  FPKVT-VSVHPKLVKFQSFSSTTACSSLPPPDLPRLAKTAQISLTPNEVEEIAPKIQQVI 82

Query: 79  EWFGQLQSVDLQSVEPSLRAESENNLRENAPETFDSRDAMIASVPSYEEPYIKVPRVLSM 138
           EWFGQLQ +DL+SVEPS+RAE+ENNLR NAPETFD RDA+IASVPSYEEPYIKVPRVLSM
Sbjct: 83  EWFGQLQGIDLESVEPSIRAETENNLRGNAPETFDHRDALIASVPSYEEPYIKVPRVLSM 142

Query: 139 D 139
           D
Sbjct: 143 D 143


>Glyma20g31750.2 
          Length = 105

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 4/82 (4%)

Query: 22  FAKVSSVGLHNK---FRSFSSTTICSSTQPPDLTSLAKKAQISLTPHQVDEFAPKIQQVI 78
           F KV+ V +H K   F+SFSSTT CSS  PPDL  LAK AQISLTP++V+E APKIQQVI
Sbjct: 24  FPKVT-VSVHPKLVKFQSFSSTTACSSLPPPDLPRLAKTAQISLTPNEVEEIAPKIQQVI 82

Query: 79  EWFGQLQSVDLQSVEPSLRAES 100
           EWFGQLQ +DL+SVEPS+RA S
Sbjct: 83  EWFGQLQGIDLESVEPSIRAGS 104