Miyakogusa Predicted Gene

Lj5g3v1815200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1815200.1 tr|I3SFN4|I3SFN4_LOTJA Chorismate synthase
OS=Lotus japonicus PE=2 SV=1,97.92,0,Chorismate_synt,Chorismate
synthase; CHORISMATE_SYNTHASE_3,Chorismate synthase, conserved site;
CHOR,CUFF.56013.1
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g31980.1                                                       363   e-101
Glyma10g35560.1                                                       361   e-100
Glyma10g35560.2                                                       282   2e-76
Glyma14g36410.1                                                        50   1e-06

>Glyma20g31980.1 
          Length = 435

 Score =  363 bits (931), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/192 (89%), Positives = 180/192 (93%)

Query: 1   MISAIDAIRVRGDSVGGVVTCIVRNCPRGFGSPVFDKLEAELAKAVMSLPATKGFQFGSG 60
           MISAIDA+RVRGDSVGGVVTCIVRNCPRG GSPVFDKLEAELAKA MSLPATKGFQFGSG
Sbjct: 244 MISAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAAMSLPATKGFQFGSG 303

Query: 61  FAGTFLTGSEHNDEFYIDEHGKMRTRTNRSGGIQGGISNGEIINMRIAFKPTATIGKKQL 120
           FAGTFLTGSEHNDEFYIDEHG  RTRTNRSGGIQGGISNGEIINMRIAFKPT+TIGKKQ 
Sbjct: 304 FAGTFLTGSEHNDEFYIDEHGNTRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQK 363

Query: 121 TVTREKKETELITRGRHDPCVVPRAVPMVEAVVALVLVDQLMAQHAQCNLFPINSELQDP 180
           TVTR+KKETE I RGRHDPCVVPRAVPMVEA+VALVLVDQLMAQ+AQCNLFP+NS+LQ+P
Sbjct: 364 TVTRDKKETEFIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCNLFPVNSDLQEP 423

Query: 181 LSSIFEPEEALF 192
           L  I  PEEAL 
Sbjct: 424 LVPILRPEEALL 435


>Glyma10g35560.1 
          Length = 436

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 172/192 (89%), Positives = 180/192 (93%)

Query: 1   MISAIDAIRVRGDSVGGVVTCIVRNCPRGFGSPVFDKLEAELAKAVMSLPATKGFQFGSG 60
           MISAIDA+RVRGDSVGGVVTCIVRNCPRG GSPVFDKLEAELAKA MSLPATKGFQFGSG
Sbjct: 245 MISAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAAMSLPATKGFQFGSG 304

Query: 61  FAGTFLTGSEHNDEFYIDEHGKMRTRTNRSGGIQGGISNGEIINMRIAFKPTATIGKKQL 120
           FAGTFLTGSEHNDEFYIDEHG  RTRTNRSGGIQGGISNGEIINMRIAFKPT+TIGKKQ 
Sbjct: 305 FAGTFLTGSEHNDEFYIDEHGNTRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQN 364

Query: 121 TVTREKKETELITRGRHDPCVVPRAVPMVEAVVALVLVDQLMAQHAQCNLFPINSELQDP 180
           TVTR+KKETE I RGRHDPCVVPRAVPMVEA+VALVLVDQLMAQ+AQCNLFP+NS+LQ+P
Sbjct: 365 TVTRDKKETEFIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCNLFPVNSDLQEP 424

Query: 181 LSSIFEPEEALF 192
           L  I  PEEAL 
Sbjct: 425 LVPILRPEEALL 436


>Glyma10g35560.2 
          Length = 389

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 134/145 (92%), Positives = 137/145 (94%)

Query: 1   MISAIDAIRVRGDSVGGVVTCIVRNCPRGFGSPVFDKLEAELAKAVMSLPATKGFQFGSG 60
           MISAIDA+RVRGDSVGGVVTCIVRNCPRG GSPVFDKLEAELAKA MSLPATKGFQFGSG
Sbjct: 245 MISAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAAMSLPATKGFQFGSG 304

Query: 61  FAGTFLTGSEHNDEFYIDEHGKMRTRTNRSGGIQGGISNGEIINMRIAFKPTATIGKKQL 120
           FAGTFLTGSEHNDEFYIDEHG  RTRTNRSGGIQGGISNGEIINMRIAFKPT+TIGKKQ 
Sbjct: 305 FAGTFLTGSEHNDEFYIDEHGNTRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQN 364

Query: 121 TVTREKKETELITRGRHDPCVVPRA 145
           TVTR+KKETE I RGRHDPCVVPR 
Sbjct: 365 TVTRDKKETEFIARGRHDPCVVPRG 389


>Glyma14g36410.1 
          Length = 214

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/27 (88%), Positives = 26/27 (96%), Gaps = 1/27 (3%)

Query: 1   MISAIDAIRVRGDSVGGV-VTCIVRNC 26
           MISAIDA+RVRGDSVGGV +TCIVRNC
Sbjct: 186 MISAIDAVRVRGDSVGGVDITCIVRNC 212