Miyakogusa Predicted Gene

Lj5g3v1808050.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1808050.1 Non Chatacterized Hit- tr|I1LVC4|I1LVC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26386 PE,60,0.000009,
,CUFF.55968.1
         (49 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36460.1                                                        54   3e-08

>Glyma12g36460.1 
          Length = 883

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 1  MEAAVDVLAPKRPAPSGISP--QGHKRLKLSSDSLPYSAHDKAVPEAPTN 48
          ME+A DV A KRP P+G SP   G KRL+LSSDSLPY A D+  P+ P N
Sbjct: 1  MESADDVSASKRPLPTGFSPGPDGPKRLRLSSDSLPYPACDQIEPKTPKN 50