Miyakogusa Predicted Gene

Lj5g3v1770480.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1770480.2 tr|C1MXS9|C1MXS9_MICPC Predicted protein
(Fragment) OS=Micromonas pusilla (strain CCMP1545)
GN=MICPU,40.51,0.000000000001,PREDICTED PROTEIN,NULL; KELCH REPEAT
DOMAIN,NULL; Kelch motif,NULL; Kelch_3,NULL; no
description,Kel,CUFF.55871.2
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g32900.1                                                       274   3e-74

>Glyma20g32900.1 
          Length = 495

 Score =  274 bits (701), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 142/157 (90%), Positives = 149/157 (94%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHS+++IGSRYLLIG
Sbjct: 249 MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSMSIIGSRYLLIG 308

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEKFHF 120
           GFDGKSTYGD WWLVPQEDPIA+RLTASPPRNI E KD TSLNDDFQPQ K++QTEKF F
Sbjct: 309 GFDGKSTYGDPWWLVPQEDPIASRLTASPPRNIPESKDVTSLNDDFQPQFKESQTEKFPF 368

Query: 121 SELQRRLQISVSPSNSRLPIVNELDDKELLELASRLA 157
           SELQRRLQISVS SNSRL IVNEL+DKELLELASRLA
Sbjct: 369 SELQRRLQISVSESNSRLHIVNELEDKELLELASRLA 405