Miyakogusa Predicted Gene

Lj5g3v1749270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1749270.1 Non Chatacterized Hit- tr|I3T5B9|I3T5B9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,77.39,0,diverge_rpsU: rpsU-divergently transcribed
protein,Ubiquinone biosynthesis protein COQ9; GB DEF: T29,CUFF.55853.1
         (310 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17150.1                                                       446   e-125
Glyma17g05570.1                                                       437   e-123

>Glyma13g17150.1 
          Length = 306

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/296 (73%), Positives = 244/296 (82%), Gaps = 5/296 (1%)

Query: 15  HYNSNTGLRFRRPQSLIASYRFSTSETQPLSDPHSTNPIYTTETPIIVDXXXXXXXXXXX 74
           +YN N GLRFR PQ  I S RFSTSETQPL  PH+T+       P++V            
Sbjct: 16  YYNGNVGLRFRPPQIFIPSSRFSTSETQPLPIPHATD----RTIPVVVTTETENPNSSDS 71

Query: 75  XXXXXXGEDFRRQETPKPGAKYEDEQARLLSASVTHVLKLGWTEAALIAGAKDVGLSPSI 134
                        +  KP AKYED+  R+L AS+++VLKLGWTEAAL+AGA+DVGLSPSI
Sbjct: 72  SASSSPSSSSTADDATKPRAKYEDQHTRVLQASLSYVLKLGWTEAALVAGARDVGLSPSI 131

Query: 135 VGSLPRKEAALVEFFMDDCLQKLIDRIDSDESLKNLLTPSDCISKLIRYRLEMQAPFISS 194
           VGS PRKEAALVE+FMD CLQ+L D+IDSDESL+NL TPSDCISKLIR+RLEMQAP+IS+
Sbjct: 132 VGSFPRKEAALVEYFMDGCLQRLADKIDSDESLQNL-TPSDCISKLIRFRLEMQAPYIST 190

Query: 195 WPQALSIQAQPVNVPTSFKQRAMLVDEIWHAAGDNASDIDWYAKRTILGGIYSTTEIYML 254
           WPQALSIQAQPVNVPTSFKQRA+LVDEIWHAAGDNASDIDWYAKRTILGGIYSTTEIYML
Sbjct: 191 WPQALSIQAQPVNVPTSFKQRAVLVDEIWHAAGDNASDIDWYAKRTILGGIYSTTEIYML 250

Query: 255 TDSSPDFRDTWSFLDARVKDAFDLKKTLQEAQYLAEAVSAGLGNSFQGFVGKVFRR 310
           TD+SPDFRDTW+FLDARVKDAFDLKKT+QEAQYLAEAVS GLGNSFQGFVGKVF+R
Sbjct: 251 TDTSPDFRDTWAFLDARVKDAFDLKKTIQEAQYLAEAVSTGLGNSFQGFVGKVFQR 306


>Glyma17g05570.1 
          Length = 291

 Score =  437 bits (1123), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/296 (73%), Positives = 241/296 (81%), Gaps = 20/296 (6%)

Query: 15  HYNSNTGLRFRRPQSLIASYRFSTSETQPLSDPHSTNPIYTTETPIIVDXXXXXXXXXXX 74
           +Y    GLRFR  Q LI S RFSTSETQPL  P +T     TETP               
Sbjct: 16  YYTGKVGLRFRPSQILIPSSRFSTSETQPLPIPVATE----TETP--------------- 56

Query: 75  XXXXXXGEDFRRQETPKPGAKYEDEQARLLSASVTHVLKLGWTEAALIAGAKDVGLSPSI 134
                           KP AKYED+Q R+L AS+++VLKLGWTEAAL+AGA+DVGLSPSI
Sbjct: 57  NSSDSSPSSSSSSTATKPRAKYEDQQTRVLQASLSYVLKLGWTEAALVAGARDVGLSPSI 116

Query: 135 VGSLPRKEAALVEFFMDDCLQKLIDRIDSDESLKNLLTPSDCISKLIRYRLEMQAPFISS 194
           VGSLPRKEA LVE+FMD CLQ+L+D+IDSDESLKNL TPSDCISKLIR+RLEMQAP+IS+
Sbjct: 117 VGSLPRKEATLVEYFMDGCLQRLVDKIDSDESLKNL-TPSDCISKLIRFRLEMQAPYIST 175

Query: 195 WPQALSIQAQPVNVPTSFKQRAMLVDEIWHAAGDNASDIDWYAKRTILGGIYSTTEIYML 254
           WPQALSIQAQPVNVPTSFKQRA+LVDEIWHAAGDNASDIDWYAKRT+LGGIYSTTEIYML
Sbjct: 176 WPQALSIQAQPVNVPTSFKQRAVLVDEIWHAAGDNASDIDWYAKRTVLGGIYSTTEIYML 235

Query: 255 TDSSPDFRDTWSFLDARVKDAFDLKKTLQEAQYLAEAVSAGLGNSFQGFVGKVFRR 310
           TDSSPDFRDTW+FLDARVKDAFD+KKT+QEAQYLAEAVS GLGNSFQGFVGKVF+R
Sbjct: 236 TDSSPDFRDTWAFLDARVKDAFDIKKTIQEAQYLAEAVSTGLGNSFQGFVGKVFQR 291