Miyakogusa Predicted Gene

Lj5g3v1749250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1749250.1 Non Chatacterized Hit- tr|G7JT65|G7JT65_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,81.05,0,RmlC-like cupins,RmlC-like cupin domain; no
description,RmlC-like jelly roll fold; Cupin_5,Protein o,CUFF.55922.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17140.1                                                       297   4e-81

>Glyma13g17140.1 
          Length = 195

 Score =  297 bits (761), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/195 (72%), Positives = 161/195 (82%), Gaps = 5/195 (2%)

Query: 1   MSLSASEIAAKLNLQPHPEGGFYAETFRDHSVHLSTSHLPPQYKVDRPVSTAIYFLLSSG 60
           MSL ASEIA KLNLQPHPEGGFY ETFRDHSV LSTS LPP+YKVDRPVST+IYFL+ SG
Sbjct: 1   MSLRASEIAKKLNLQPHPEGGFYVETFRDHSVQLSTSQLPPEYKVDRPVSTSIYFLVPSG 60

Query: 61  NLSRLHRIPCAETWHHYIGESITVVELNEQDSTVKFTRLGSDLADNQTPQYSVPPNIWFG 120
           ++SRLHRIPCAETWHHYIG+ +TVVELNE+D +VKFT LGSDL  NQ PQY+VPPN+WFG
Sbjct: 61  SVSRLHRIPCAETWHHYIGDPLTVVELNEKDGSVKFTCLGSDLTQNQVPQYTVPPNVWFG 120

Query: 121 SFPTKDFTISADG-----GGFVNTPPRDAETHYSLVGCTCAPGFQFNDFELAKRSELVSR 175
           SFPTKDFT SADG             RD+E +Y+LVGCTCAP FQ+ DFELAK S L++R
Sbjct: 121 SFPTKDFTYSADGVFGSAEAEAEAEARDSERNYTLVGCTCAPAFQYQDFELAKPSYLLAR 180

Query: 176 FPQLEALITALTFPD 190
           FPQ   L+TALTFP+
Sbjct: 181 FPQFHPLVTALTFPE 195