Miyakogusa Predicted Gene

Lj5g3v1697600.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1697600.2 Non Chatacterized Hit- tr|A9NUV4|A9NUV4_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,32.74,6e-19,coiled-coil,NULL,CUFF.55757.2
         (245 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g10170.1                                                       110   2e-24
Glyma11g17900.1                                                       105   3e-23

>Glyma12g10170.1 
          Length = 274

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 11/202 (5%)

Query: 47  YNEAQGNNGIQSYVPDEIIDPKFSRLNQGNQEKDHSHEQDMEIGYEESPPQPTYEGLEQR 106
           +NE QG +  +SY          SR N  +  +  +H +DM++GYE +    ++EGLEQ 
Sbjct: 80  FNEGQGVDASKSYFQGP------SRNN--SDSRSQAHGEDMDVGYEGNHLSQSFEGLEQN 131

Query: 107 FAAEIMKLSREQRDAEDTEFARHMERMLDINKEYQEKLSSLRAQQTTRREEFLHKELQSR 166
           F  +I+KL++EQ DAED E+ARH E++  IN +Y+EKL++LRAQ ++RR EFL +E  +R
Sbjct: 132 FHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSSRRAEFLQRESHAR 191

Query: 167 LNQYQESKRNHRPYMKVTDADSYIPASTFTAGEG-TSRFHDATEYKRGGECS--ISSGRS 223
             QYQ+  R+  P   +   D +   +   +G G   R + A       E +  +  GR 
Sbjct: 192 QQQYQQIIRDPYPSGGMAPGDPHGYNNVNASGTGEVQRGYSADHLDPYRERARFLGGGRD 251

Query: 224 KGSEARVPLPPGRVYNNKTVYH 245
           +G E R P P GRVY+  + Y+
Sbjct: 252 QGFEPRGPYPGGRVYDTGSRYY 273


>Glyma11g17900.1 
          Length = 285

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 26/216 (12%)

Query: 47  YNEAQGNNGIQSYVPDEIIDPKFSRLNQGNQEKDHSHEQDMEIGYEESPPQPTYEGLEQR 106
           +NE QG +  + Y   +      SR N  +  +  +HE+DM++ YE      ++EGLEQ 
Sbjct: 78  FNEGQGVDASKPYFQGQ------SRNN--SDSRSQAHEEDMDVRYEGEHLSQSFEGLEQN 129

Query: 107 FAAEIMKLSREQRDAEDTEFARHMERMLDINKEYQEKLSSLRAQQTTRREEFLHKELQSR 166
           F  +I+KL++EQ DAED E+ARH E++  IN +Y+EKL++LRAQ ++RR EFL +E  +R
Sbjct: 130 FHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSSRRAEFLQRESHAR 189

Query: 167 LNQYQESKRNHRPYMKVTDADSYIPASTFTAGEGTSRFHDATEYKRGGECS--------- 217
             QYQ+  R+  P   +   D + P     A      +++  +   GGE           
Sbjct: 190 QQQYQQIIRDPYPGGGMAPRDPHAPRDPH-APRDPHGYNNVNDSGAGGEVQRGYSADHFD 248

Query: 218 --------ISSGRSKGSEARVPLPPGRVYNNKTVYH 245
                   +  GR +G E R P P GRVY+  + Y+
Sbjct: 249 PYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYY 284