Miyakogusa Predicted Gene
- Lj5g3v1697440.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1697440.2 tr|G7I306|G7I306_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_070s0024 PE=4
S,88.13,0,GPROTEINBRPT,G-protein beta WD-40 repeat; WD40
repeat-like,WD40-repeat-containing domain; WD40 repea,CUFF.55755.2
(497 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g33860.1 408 e-114
Glyma05g35600.1 330 3e-90
Glyma09g04920.1 150 2e-36
Glyma05g35600.2 148 2e-35
Glyma15g15950.1 147 2e-35
Glyma08g04140.1 145 1e-34
Glyma09g27300.1 58 2e-08
Glyma16g32370.1 58 2e-08
Glyma15g13280.1 54 4e-07
Glyma15g19160.1 50 5e-06
Glyma15g19170.1 49 9e-06
>Glyma10g33860.1
Length = 225
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/227 (88%), Positives = 210/227 (92%), Gaps = 2/227 (0%)
Query: 271 DRLYSGSLDKTIRVWTIKSDGIKCIDVYDIKEAVHELAANDKLACYVSQGTGVKVFNWSE 330
DRLYSGSLDKTIRVWT+K D IKCIDV+D+KE V+EL N KLACYVSQG+GV FNWSE
Sbjct: 1 DRLYSGSLDKTIRVWTVKPDEIKCIDVHDVKEPVYELTVNAKLACYVSQGSGV--FNWSE 58
Query: 331 APKLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNSFFTGTRKLLGKQTIHSLQ 390
APKLINF+KYVK LA AGDKLYCGCSGYSIQEVDLS TSNSFF+GTRKLLGKQTIHSL+
Sbjct: 59 APKLINFNKYVKCLAGAGDKLYCGCSGYSIQEVDLSKNTSNSFFSGTRKLLGKQTIHSLR 118
Query: 391 IHDDYLFACGSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVW 450
IHD +LFACGSSVDA AGKIFSLS KMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVW
Sbjct: 119 IHDGFLFACGSSVDANAGKIFSLSSKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVW 178
Query: 451 LKDKFTRVASIKMAGGHTKITSLVSDVDGMMLFVGSSDGKIQVWALD 497
LKDK TRVASIKMAGGHTKITSLVSD DGMMLFVGSSDGKIQVWALD
Sbjct: 179 LKDKLTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQVWALD 225
>Glyma05g35600.1
Length = 1296
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 184/448 (41%), Positives = 281/448 (62%), Gaps = 18/448 (4%)
Query: 1 MKALDALLFLIGHISSSGKSYTEAWLLKIAGFDQPYNALMKVEQLGQHDNDLIETMEDEK 60
+ A D ++ L G SG T LLK AG ++ +L++V Q+ ++ T E+EK
Sbjct: 839 LAAADTVISLQGSFDFSGNPLTREVLLKRAGIEKSSRSLVQVNQISNFSPEIDITPEEEK 898
Query: 61 NALNSWQKRIASVLCNHENGSIFKALEECLKSNSLKMAKSCLVLATWLTHMLYTLPDTGV 120
A + W++RIASVL +HE G++F+AL + +KS + ++ +C + ATWL +ML LPDTG+
Sbjct: 899 -AADDWERRIASVLVSHEFGTLFEALADGMKSRNPELRSACFISATWLIYMLTILPDTGI 957
Query: 121 RDVARKSLLEEVINVLQSSKNLEEKILATLALKTFISDPSTHEALRVYAKSIYRTLRRLK 180
+ AR LL++ I L S+K++E++IL+ LAL +F+ L Y K I + LR LK
Sbjct: 958 QVAARACLLKQFIAKLNSTKDVEDRILSMLALNSFLHFSDGLGDLTSYTKDIIKGLRELK 1017
Query: 181 KYSVVAVDIMKVILNLKSVDVTELWSCKEVVELDLSSNGEVLSMVYLNGQVLSGHTDGTI 240
+ +A ++KV++ ++ ++W ++++ D S NGEVLS++ + SGHTDGTI
Sbjct: 1018 RSCPLATKMLKVLVE-ENESKADIWIHTQLIKEDCSENGEVLSVICFKDKFFSGHTDGTI 1076
Query: 241 KVWDARKRIPRVIQETHEHTKAVTSLC--SSGDRLYSGSLDKTIRVWTIKSDGIKCIDVY 298
KVW + + ++QE EHTKAVT+L S DRLYSGSLD+T + V+
Sbjct: 1077 KVWTLKDNLFYLLQEIQEHTKAVTNLVILESDDRLYSGSLDRTAK-------------VH 1123
Query: 299 DIKEAVHELAANDKLACYVSQGTGVKVFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGY 358
D+K+ +H L + LAC++ QGTGVKV + + KL+N SKYVK LA KLYCGC
Sbjct: 1124 DMKDQIHNLVVTNSLACFIPQGTGVKVQSLNGESKLLNSSKYVKCLAHVHGKLYCGCHDS 1183
Query: 359 SIQEVDLSTYTSNSFFTGTRKLLGK-QTIHSLQIHDDYLFACGSSVDATAGKIFSLSQKM 417
S+QE+ L+T T N+ +G ++LLGK IH+LQIH + ++A GS++D +A KI++ S
Sbjct: 1184 SVQEIHLATGTVNTIQSGYKRLLGKANPIHALQIHGELVYAAGSNLDGSAIKIWNNSNYS 1243
Query: 418 VVGSLSTGLDIHRIAINSDFIFAGTKFG 445
+VGSL TG D+ +A++S+ I+ G K G
Sbjct: 1244 MVGSLQTGSDVRAMAVSSELIYLGCKGG 1271
>Glyma09g04920.1
Length = 1320
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 231/491 (47%), Gaps = 61/491 (12%)
Query: 10 LIGHISSSGKSYTEAWLLKIAGFDQPYNALMKVEQLGQHDNDLIETMEDEKNALNSWQKR 69
L G + +G+ YT AWLL+ G PY+ + + ++ N L ++++D L W +
Sbjct: 882 LAGTYAWTGEPYTAAWLLRKTGLTSPYH-----QNMIRNFNWLDQSLQDTSTDL--WCSK 934
Query: 70 IASVLCNHENGSIFKALEECLKSNSLKMAKSCLVLATWLTHMLYTLPDTGVRDVARKSLL 129
I+ + +H S+F LE L+S ++++ CL+ +WL + PD+ + A + +L
Sbjct: 935 ISKCIISH-GDSVFHTLERVLRSKIKRVSRDCLIAISWLGFQISKSPDS-ISYSASEVIL 992
Query: 130 EEVINVLQSSKNLEEKILATLALKTFISDPSTHEALRVYAKSIYRTLRRLKKYSVVAVDI 189
+ L EE++LA + + + S + + +++ + +LRRL
Sbjct: 993 SGIEQFLHPGIESEERLLACMCMFNYASGKGKQKLMH-FSEGVKESLRRLSNV------- 1044
Query: 190 MKVILNLKSVDVTELWSCKEVVELDLSSNGEVLSMVYLNGQVLSGHTDGTIKVWDARKRI 249
+W +E+ V + N I VWD R
Sbjct: 1045 --------------IWMAEEL--------HRVADFLLPN-----------ISVWDIRGHS 1071
Query: 250 PRVIQETHEHTKAVT--SLCSSGDRLYSGSLDKTIRVWTIKSDGIKCIDVYDIKEAVHEL 307
++ + EH K+VT SL D L SGS DKTIRVW + ++C++V +KE +H L
Sbjct: 1072 ASLVWDIKEHKKSVTCFSLHEPSDSLLSGSTDKTIRVWKMIQRKLECVEVIALKEPIHHL 1131
Query: 308 AANDKLACYVSQGTGVKVFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLST 367
A+ + +S+ G+K+ N S K I K+VK + VA KLY GC+ SIQE +
Sbjct: 1132 RAHGETIFAISESHGLKLVNESRVTKDILKGKHVKCMTVAQGKLYIGCTDSSIQEYSTTH 1191
Query: 368 YTSNSFFTGTRKLLGK-QTIHSLQIHDDYLFACGSSVDATAGKIFSLSQKMVVGSLS-TG 425
TR + + I+++ + D+L++ V+ T K + ++K V + G
Sbjct: 1192 NRELEIKPPTRSWRKQSKPINAVVAYRDWLYSANKYVEGTTFKEWKRTKKPKVSIFTDKG 1251
Query: 426 LDIHRIAINSDFIF--AGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDVDGMMLF 483
++ + + DF++ + + I++WL+ ++ I AG +KITS+++ D ++F
Sbjct: 1252 DNVAAMEVVEDFLYLISSSSPNNIQIWLRGAPKKLGRIS-AG--SKITSILAAND--IIF 1306
Query: 484 VGSSDGKIQVW 494
G+ G I+ W
Sbjct: 1307 CGTETGLIKGW 1317
>Glyma05g35600.2
Length = 173
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 114/166 (68%), Gaps = 2/166 (1%)
Query: 333 KLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNSFFTGTRKLLGK-QTIHSLQI 391
KL+N SKYVK LA KLYCGC S+QE+ L+T T N+ +G ++LLGK IH+LQI
Sbjct: 9 KLLNSSKYVKCLAHVHGKLYCGCHDSSVQEIHLATGTVNTIQSGYKRLLGKANPIHALQI 68
Query: 392 HDDYLFACGSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWL 451
H + ++A GS++D +A KI++ S +VGSL TG D+ +A++S+ I+ G K GT+E+W
Sbjct: 69 HGELVYAAGSNLDGSAIKIWNNSNYSMVGSLQTGSDVRAMAVSSELIYLGCKGGTLEIWD 128
Query: 452 KDKFTRVASIKMAGGHTKITSLVSDVDGMMLFVGSSDGKIQVWALD 497
K K RV +++M G + ++ + D +G +L +G+SDG+IQ W ++
Sbjct: 129 KKKHNRVDTLQM-GTNCRVNCMALDGNGEVLVIGTSDGQIQAWGMN 173
>Glyma15g15950.1
Length = 1109
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 236/496 (47%), Gaps = 67/496 (13%)
Query: 10 LIGHISSSGKSYTEAWLLKIAGFDQPYNALMKVEQLGQHDNDLIETMEDEKNALNSWQKR 69
L G + +G+ YT AWLL+ G PY+ + + ++ N L ++++D L W +
Sbjct: 632 LAGTYAWTGEPYTAAWLLRKTGLTSPYH-----QNMIRNFNWLDQSLQDTSTDL--WCGK 684
Query: 70 IASVLCNHENGSIFKALEECLKSNSLKMAKSCLVLATWLTHMLYTLPDTGVRDVARKSLL 129
IA + + S+F LE L+S ++++ CL+ +WL + +PD+ + A + +L
Sbjct: 685 IAKCIISL-GDSVFHTLERVLRSKIKRVSRDCLIAISWLGCQISKIPDS-ISYSASEVIL 742
Query: 130 EEVINVLQSSKNLEEKILATLALKTFISDPST-----HEALRVYAKSIYRTLRRLKKYSV 184
+ L LEE++LA + + + S + L +++ + +LRRL
Sbjct: 743 SGIEQFLHPGIELEERLLACMCMFNYASGKVGVFHVGKQKLMHFSEGVKESLRRLSNI-- 800
Query: 185 VAVDIMKVILNLKSVDVTELWSCKEVVELDLSSNGEVLSMVYLNGQVLSGHTDGTIKVWD 244
+W +E+ V + N I VWD
Sbjct: 801 -------------------IWMAEEL--------HRVADFLLPN-----------ISVWD 822
Query: 245 ARKRIPRVIQETHEHTKAVT--SLCSSGDRLYSGSLDKTIRVWTIKSDGIKCIDVYDIKE 302
R ++ + EH K+VT SL D L SGS DKTIRVW + ++C++V +KE
Sbjct: 823 IRGHSASLVWDIKEHKKSVTCFSLYEPSDSLLSGSTDKTIRVWKMIQRKLECVEVIALKE 882
Query: 303 AVHELAANDKLACYVSQGTGVKVFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGYSIQE 362
+H L A+ + +S+ G+K+ N S K I K+VK + VA KLY GC+ SIQE
Sbjct: 883 PIHHLRAHGETIFSISESLGLKLVNESRVTKDILKGKHVKCMTVAQGKLYFGCTDSSIQE 942
Query: 363 VDLSTYTSNSFFTGTRKLLGKQT--IHSLQIHDDYLFACGSSVDATAGKIFSLSQKMVVG 420
ST+ + KQ+ I+++ + D+L++ V+ T K + +++ V
Sbjct: 943 YS-STHNRELEIKPPTRSWRKQSKPINAVVAYRDWLYSANKHVEGTTFKEWKRTKRPKVS 1001
Query: 421 SLS-TGLDIHRIAINSDFIF--AGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDV 477
L+ G ++ + + DF++ + + I++WL++ ++ I AG +KITS+++
Sbjct: 1002 ILTDKGDNVVDMEVVEDFLYLISSSSPNNIQIWLREAPKKLGRIS-AG--SKITSILAAN 1058
Query: 478 DGMMLFVGSSDGKIQV 493
D ++F G+ G I+V
Sbjct: 1059 D--IIFCGTETGLIKV 1072
>Glyma08g04140.1
Length = 166
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 112/166 (67%), Gaps = 2/166 (1%)
Query: 333 KLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNSFFTGTRKLLGK-QTIHSLQI 391
KL+N SKYVK LA KLYCGC S+QE+ L+T T N+ +G ++LLGK IH+LQI
Sbjct: 2 KLLNSSKYVKCLAHVHGKLYCGCHDSSVQEIHLATGTVNTIQSGYKRLLGKANPIHALQI 61
Query: 392 HDDYLFACGSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWL 451
H + ++A GSS+D +A KI++ S +VGSL TG D+ + ++S+ I+ G K GT+E+W
Sbjct: 62 HGELIYAAGSSLDGSAIKIWNNSNYSIVGSLQTGSDVRAMEVSSELIYLGCKGGTVEIWD 121
Query: 452 KDKFTRVASIKMAGGHTKITSLVSDVDGMMLFVGSSDGKIQVWALD 497
K K RV +++M G + ++ + D + +L +G+SDG+IQ W ++
Sbjct: 122 KKKHKRVDTLQM-GTNCRVNCMALDSNEEVLVIGTSDGQIQAWGMN 166
>Glyma09g27300.1
Length = 426
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 200 DVTELWSCKEVVELDLSSN-GEVLSMVYLNGQVLSGHTDGTIKVW--DARKRIPRVIQET 256
+ + W+ + + EL L+ G+V ++V N + +G DG+I W +
Sbjct: 200 NFVKAWNTQNLSELSLNGPVGQVYALVVNNDMLFAGTQDGSILAWKFNVATNCFEPAASL 259
Query: 257 HEHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKSDGIKCID-VYDIKEAVHELAANDKLAC 315
H++ V SL +RLYSGS+D TI+VW +++ ++C+ + + V + D+
Sbjct: 260 KGHSRGVVSLVVGANRLYSGSMDNTIKVWNLET--LQCLQTLTEHTSVVMSVLCWDQFLL 317
Query: 316 YVSQGTGVKVFNWSEAPKL-INFSKYVKS--LAVAG-------DKLYCGCSGYSIQEVDL 365
S VKV+ +E+ L + +S ++ L + G L C C+ ++ DL
Sbjct: 318 SCSLDKTVKVWYATESGNLEVTYSHNEENGILTLCGMHDSQGKPILLCACNDNTVHLYDL 377
Query: 366 STYTSNSFFTGTRKLLGKQTIHSLQIHDDYLFACG 400
++ K+L KQ + ++QI + +F G
Sbjct: 378 PSFAERG------KILTKQEVRAIQIGPNGIFFTG 406
>Glyma16g32370.1
Length = 427
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 200 DVTELWSCKEVVELDLSSN-GEVLSMVYLNGQVLSGHTDGTIKVW--DARKRIPRVIQET 256
+ + W+ + + EL L+ G+V ++V N + +G DG+I W +
Sbjct: 201 NFVKAWNTQNLSELSLNGPVGQVYALVVNNDMLFAGTQDGSILAWKFNVATNCFEPAASL 260
Query: 257 HEHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKSDGIKCID-VYDIKEAVHELAANDKLAC 315
H++ V SL +RLYSGS+D TIRVW +++ ++C+ + + V + D+
Sbjct: 261 KGHSRGVVSLVVGANRLYSGSMDNTIRVWNLET--LQCLQTLTEHTSVVMSVLCWDQFLL 318
Query: 316 YVSQGTGVKVFNWSEAPKL-----INFSKYVKSLAVAGDK-----LYCGCSGYSIQEVDL 365
S VKV+ +E+ L N + +L D L C C+ ++ DL
Sbjct: 319 SCSLDKTVKVWYATESGNLEVTYTHNEENGILTLCGMHDSQGKPILLCACNDNTVHLYDL 378
Query: 366 STYTSNSFFTGTRKLLGKQTIHSLQIHDDYLFACG 400
++ K+L K+ + ++QI + +F G
Sbjct: 379 PSFAERG------KILTKKEVRAIQIGPNGIFFTG 407
>Glyma15g13280.1
Length = 983
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 16/154 (10%)
Query: 6 ALLFLIGHISSSGKSYTEAWLLKIAGFDQ-------PYNALMKVEQLGQHDNDLIETMED 58
AL+ L GH S SG S E LL+ AGF + P ++ + + H N +E+
Sbjct: 789 ALVLLGGHFSDSGDSLMEKSLLQKAGFREICLEDSYPGKEIVVYDPI--HKN-----VEE 841
Query: 59 EKNALNSWQKRIASVLCNHENGSIFKALEECLKSNSLKMAKSCLVLATWLTHMLYTLPDT 118
E+ + WQKR A VL ++ AL + + + +A++ L+ +W++ L + D
Sbjct: 842 EEAEI--WQKRAACVLFKSGKKNLLSALADSIANGIPCLARASLITISWMSSYLNIVEDR 899
Query: 119 GVRDVARKSLLEEVINVLQSSKNLEEKILATLAL 152
+ + L +++ L K++EE++LA+ +L
Sbjct: 900 KLPPMVFSILRPQLLRSLNYDKDVEERVLASYSL 933
>Glyma15g19160.1
Length = 390
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 200 DVTELWSCKEVVELDL-SSNGEVLSMVYLNGQVLSGHTDGTIKVWDARKRI--P-RVIQE 255
+ + W+ + ++E L G V +M N + +G DG I W + P ++
Sbjct: 163 NAVKAWNIQTMLEFTLDGPKGRVRAMTVGNNTLFAGAEDGVIFAWRGSSKADSPFELVAS 222
Query: 256 THEHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKSDGIKC-IDVYDIKEAVHELAANDKLA 314
HTKAV L LYSGS+D++I+VW + D ++C + + D +AV L D+
Sbjct: 223 LTGHTKAVVCLAVGCKMLYSGSMDQSIKVWDM--DTLQCTMTLNDHTDAVTSLICWDQYL 280
Query: 315 CYVSQGTGVKVFNWSEAPKL 334
S +KV+ EA L
Sbjct: 281 LSSSSDRTIKVWACIEAGSL 300
>Glyma15g19170.1
Length = 370
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 200 DVTELWSCKEVVELDL-SSNGEVLSMVYLNGQVLSGHTDGTIKVWDARKRI--P-RVIQE 255
+ + W+ + + E L G V +M N + +G DG I W + P ++
Sbjct: 143 NAVKAWNIQTMSEFTLDGPKGRVRAMTVGNNTLFAGAEDGVIFAWRGSSKADSPFELVAS 202
Query: 256 THEHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKSDGIKC-IDVYDIKEAVHELAANDKLA 314
HTKAV L LYSGS+D++I+VW + D ++C + + D +AV L D+
Sbjct: 203 LTGHTKAVVCLAVGCKMLYSGSMDQSIKVWDM--DTLQCTMTLNDHTDAVTSLICWDQYL 260
Query: 315 CYVSQGTGVKVFNWSEAPKL 334
S +KV+ EA L
Sbjct: 261 LSSSSDRTIKVWACIEAGSL 280