Miyakogusa Predicted Gene

Lj5g3v1697110.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1697110.2 Non Chatacterized Hit- tr|I1LCH7|I1LCH7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.27,0,TRANSCRIPTION
INITIATION FACTOR IIH-RELATED,NULL; BSD,BSD; seg,NULL; BSD
domain-like,NULL; PH domain,CUFF.55744.2
         (583 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g33660.1                                                       983   0.0  
Glyma20g33940.1                                                       975   0.0  
Glyma10g33660.3                                                       900   0.0  
Glyma10g33660.2                                                       796   0.0  

>Glyma10g33660.1 
          Length = 587

 Score =  983 bits (2542), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/585 (82%), Positives = 519/585 (88%), Gaps = 3/585 (0%)

Query: 1   MSSGQVVKRAKYKTTVKGPGTPGILKLTQDKFVFKPNDPTSNNKLDVEFRFIKGHRVTKE 60
           MSS QVVKRAKYKTTVK PGTPG+LKLTQD+FVFKPNDPTS  KLDVEFRFI+GH+VTKE
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 61  GSKQP-LLNLTHAQGSYIFELESFPDLHVCRELVGNALSKHV--EAPKVTTEEQLSTAEL 117
           GSKQP LLNL  AQGS IFELESF DLHVCRELVG AL+++V  EA KV +EEQLS AE+
Sbjct: 61  GSKQPPLLNLIRAQGSCIFELESFADLHVCRELVGFALNRNVPGEATKVISEEQLSPAEM 120

Query: 118 TLRLKLLQEDSKLQKLFKELVAGGKLTESEFWATKKKMLDQDESRKSKQRIGFKNSLIFD 177
            LR+KLLQEDSKLQ+L KELVA GKLTESEFWATKKK+LDQDESRK KQRIGFKNSLIFD
Sbjct: 121 ALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFD 180

Query: 178 TKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFFNFVPKKMTEVDFWNKYFKAEYLHS 237
           TKP SDGRINQVKFQLTPEIKYQIFALKPAVHQAF NFVP KM EVDFWNKYFKAEYLHS
Sbjct: 181 TKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHS 240

Query: 238 TKNIIXXXXXXXXXXXXXVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 297
           TKN +             VFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI
Sbjct: 241 TKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 300

Query: 298 FRDGSKEIPEAQHPLYRRTLLQDLNRQGAVVLEGKTLDMETEQPRTVAEVIARRQQESDG 357
           FRDGSK+I EAQ+ LY+RTLLQDLNRQGAVVLEGKTLDME E PRTVAE++ARR+QE DG
Sbjct: 301 FRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQECDG 360

Query: 358 VREEERRNRISKMTQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTLDDSLAGMEQT 417
           V +EERRNRISKMT IEDLQAQD+HP+APLCIKDPRDYFDSQQANAVKTLDDS AGMEQ 
Sbjct: 361 VVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKTLDDSQAGMEQM 420

Query: 418 RCSLGSEEAYGSLRASISKIKAKGLKDPLLSPEVALKVLNGLTKNISSTKSHLGKNSQES 477
           +CSLGSEEAY SLRASISKIK  GL+DPL SP+VALKVLNGLTKNI+STK HLGK+SQES
Sbjct: 421 KCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNITSTKYHLGKSSQES 480

Query: 478 VLDLLPSTTKEKLLDHWVCSQELLRHFWSSYPITAQNLISKTARLKEAISQIYSKLEEIK 537
           VLD+LP++TKEKLLDHWVCSQELLRHFWSSYP++ QNL+SKT RLK++ISQIYSKLE+IK
Sbjct: 481 VLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSISQIYSKLEDIK 540

Query: 538 VSAQSDLRHQVSLIVHPMQQXXXXXXXXXXXXIKKRNARGQKPNG 582
           VSA+SDLRH VSL+VHPMQQ            I+KRNARGQKPNG
Sbjct: 541 VSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNARGQKPNG 585


>Glyma20g33940.1 
          Length = 587

 Score =  975 bits (2521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/585 (81%), Positives = 516/585 (88%), Gaps = 3/585 (0%)

Query: 1   MSSGQVVKRAKYKTTVKGPGTPGILKLTQDKFVFKPNDPTSNNKLDVEFRFIKGHRVTKE 60
           MSS QVVKRAKYKTTVK PGTPG+LKLTQDKFVFKPNDPTS  KLDVEFRFI+GH+VTKE
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 61  GSKQP-LLNLTHAQGSYIFELESFPDLHVCRELVGNALSKHV--EAPKVTTEEQLSTAEL 117
           GSK+P  LNL H+QGSYIFELE+F DLHVCRELVG AL+K V  EA KV +EEQLS AE+
Sbjct: 61  GSKKPAWLNLIHSQGSYIFELETFADLHVCRELVGVALNKQVPGEATKVISEEQLSPAEM 120

Query: 118 TLRLKLLQEDSKLQKLFKELVAGGKLTESEFWATKKKMLDQDESRKSKQRIGFKNSLIFD 177
            L++KLLQEDSKLQ+L KELVA GKLTESEFWATKKKMLDQDESRK KQ+IGFKNSLIFD
Sbjct: 121 ALKIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKMLDQDESRKLKQQIGFKNSLIFD 180

Query: 178 TKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFFNFVPKKMTEVDFWNKYFKAEYLHS 237
           TKP SDGRINQVKFQLTPEIKYQIFALKPAVHQAF NFVP+KM EVDFWNKYFKAEYLHS
Sbjct: 181 TKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPRKMNEVDFWNKYFKAEYLHS 240

Query: 238 TKNIIXXXXXXXXXXXXXVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 297
           TKN +             VFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI
Sbjct: 241 TKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 300

Query: 298 FRDGSKEIPEAQHPLYRRTLLQDLNRQGAVVLEGKTLDMETEQPRTVAEVIARRQQESDG 357
           FRDGSK+I EAQ+ LY+RTLLQDLNRQGAVVLEGKTLDME E PRTVAE++ARR+QE DG
Sbjct: 301 FRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQECDG 360

Query: 358 VREEERRNRISKMTQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTLDDSLAGMEQT 417
           V +EER+NRISKMT I+DLQAQD+HP+APLCIKDPRDYFD QQANAVKTLDDS  GMEQ 
Sbjct: 361 VVDEERQNRISKMTLIDDLQAQDNHPYAPLCIKDPRDYFDFQQANAVKTLDDSQTGMEQM 420

Query: 418 RCSLGSEEAYGSLRASISKIKAKGLKDPLLSPEVALKVLNGLTKNISSTKSHLGKNSQES 477
           +CSLGSEEAYGSLRASISKIK  GL+DPL SP+VALKVLNGLTKNISS K HLG++SQ S
Sbjct: 421 KCSLGSEEAYGSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNISSPKYHLGRSSQGS 480

Query: 478 VLDLLPSTTKEKLLDHWVCSQELLRHFWSSYPITAQNLISKTARLKEAISQIYSKLEEIK 537
           VLD+LP+TTKE LLDHWVCSQELLRHFWSSYPIT QNL++KT RLKE+ISQIYSKLE+IK
Sbjct: 481 VLDILPNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNKTRRLKESISQIYSKLEDIK 540

Query: 538 VSAQSDLRHQVSLIVHPMQQXXXXXXXXXXXXIKKRNARGQKPNG 582
           VSA+SDLRH VSL+VHPMQQ            I+KRNARGQKPNG
Sbjct: 541 VSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNARGQKPNG 585


>Glyma10g33660.3 
          Length = 549

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/585 (76%), Positives = 482/585 (82%), Gaps = 41/585 (7%)

Query: 1   MSSGQVVKRAKYKTTVKGPGTPGILKLTQDKFVFKPNDPTSNNKLDVEFRFIKGHRVTKE 60
           MSS QVVKRAKYKTTVK PGTPG+LKLTQD+FVFKPNDPTS  KLDVEFRFI+GH+VTKE
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 61  GSKQP-LLNLTHAQGSYIFELESFPDLHVCRELVGNALSKHV--EAPKVTTEEQLSTAEL 117
           GSKQP LLNL  AQGS IFELESF DLHVCRELVG AL+++V  EA KV +EEQLS AE+
Sbjct: 61  GSKQPPLLNLIRAQGSCIFELESFADLHVCRELVGFALNRNVPGEATKVISEEQLSPAEM 120

Query: 118 TLRLKLLQEDSKLQKLFKELVAGGKLTESEFWATKKKMLDQDESRKSKQRIGFKNSLIFD 177
            LR+KLLQEDSKLQ+L KELVA GKLTESEFWATKKK+LDQDESRK KQRIGFKNSLIFD
Sbjct: 121 ALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFD 180

Query: 178 TKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFFNFVPKKMTEVDFWNKYFKAEYLHS 237
           TKP SDGRINQVKFQLTPEIKYQIFALKPAVHQAF NFVP KM EVDFWNKYFKAEYLHS
Sbjct: 181 TKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHS 240

Query: 238 TKNIIXXXXXXXXXXXXXVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 297
           TKN +             VFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI
Sbjct: 241 TKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 300

Query: 298 FRDGSKEIPEAQHPLYRRTLLQDLNRQGAVVLEGKTLDMETEQPRTVAEVIARRQQESDG 357
           FRDGSK+I EAQ+ LY+RTLLQDLNRQGAVVLEGKTLDME E PRTVAE++ARR+QE DG
Sbjct: 301 FRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQECDG 360

Query: 358 VREEERRNRISKMTQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTLDDSLAGMEQT 417
           V +EERRNRISKMT IEDLQAQD+HP+APLCIKDPRDYFDSQQANAVKTLDDS AGMEQ 
Sbjct: 361 VVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKTLDDSQAGMEQM 420

Query: 418 RCSLGSEEAYGSLRASISKIKAKGLKDPLLSPEVALKVLNGLTKNISSTKSHLGKNSQES 477
           +CSLGSEEAY SLRASISKIK  GL+DPL SP+VALK                       
Sbjct: 421 KCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALK----------------------- 457

Query: 478 VLDLLPSTTKEKLLDHWVCSQELLRHFWSSYPITAQNLISKTARLKEAISQIYSKLEEIK 537
                          HWVCSQELLRHFWSSYP++ QNL+SKT RLK++ISQIYSKLE+IK
Sbjct: 458 ---------------HWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSISQIYSKLEDIK 502

Query: 538 VSAQSDLRHQVSLIVHPMQQXXXXXXXXXXXXIKKRNARGQKPNG 582
           VSA+SDLRH VSL+VHPMQQ            I+KRNARGQKPNG
Sbjct: 503 VSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNARGQKPNG 547


>Glyma10g33660.2 
          Length = 523

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/585 (70%), Positives = 444/585 (75%), Gaps = 67/585 (11%)

Query: 1   MSSGQVVKRAKYKTTVKGPGTPGILKLTQDKFVFKPNDPTSNNKLDVEFRFIKGHRVTKE 60
           MSS QVVKRAKYKTTVK PGTPG+LKLTQD+FVFKPNDPTS  KLDVEFRFI+GH+VTKE
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 61  GSKQP-LLNLTHAQGSYIFELESFPDLHVCRELVGNALSKHV--EAPKVTTEEQLSTAEL 117
           GSKQP LLNL  AQGS IFELESF DLHVCRELVG AL+++V  EA KV +EEQLS AE+
Sbjct: 61  GSKQPPLLNLIRAQGSCIFELESFADLHVCRELVGFALNRNVPGEATKVISEEQLSPAEM 120

Query: 118 TLRLKLLQEDSKLQKLFKELVAGGKLTESEFWATKKKMLDQDESRKSKQRIGFKNSLIFD 177
            LR+KLLQEDSKLQ+L KELVA GKLTESEFWATKKK+LDQDESRK KQRIGFKNSLIFD
Sbjct: 121 ALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFD 180

Query: 178 TKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFFNFVPKKMTEVDFWNKYFKAEYLHS 237
           TKP SDGRINQVKFQLTPEIKYQIFALKPAVHQAF NFVP KM EVDFWNKYFKAEYLHS
Sbjct: 181 TKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHS 240

Query: 238 TKNIIXXXXXXXXXXXXXVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 297
           TKN +             VFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI
Sbjct: 241 TKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGI 300

Query: 298 FRDGSKEIPEAQHPLYRRTLLQDLNRQGAVVLEGKTLDMETEQPRTVAEVIARRQQESDG 357
           FRDGSK+I EAQ+ LY+RTLLQDLNRQGAVVLEGKTLDME E PRTVAE++ARR+QE DG
Sbjct: 301 FRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQECDG 360

Query: 358 VREEERRNRISKMTQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTLDDSLAGMEQT 417
           V +EERRNRISKMT IEDLQAQD+HP+APLCIKDPRDYFDSQQANAVKTLDDS AGMEQ 
Sbjct: 361 VVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKTLDDSQAGMEQM 420

Query: 418 RCSLGSEEAYGSLRASISKIKAKGLKDPLLSPEVALKVLNGLTKNISSTKSHLGKNSQES 477
           +CSLGSEEAY SLRASISKIK  GL+DPL SP+VALK    L  +IS   S         
Sbjct: 421 KCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKT-RRLKDSISQIYS--------- 470

Query: 478 VLDLLPSTTKEKLLDHWVCSQELLRHFWSSYPITAQNLISKTARLKEAISQIYSKLEEIK 537
                      KL D  V ++  LRH                                  
Sbjct: 471 -----------KLEDIKVSAESDLRH---------------------------------- 485

Query: 538 VSAQSDLRHQVSLIVHPMQQXXXXXXXXXXXXIKKRNARGQKPNG 582
                     VSL+VHPMQQ            I+KRNARGQKPNG
Sbjct: 486 ---------HVSLVVHPMQQALNAALLHYEADIRKRNARGQKPNG 521