Miyakogusa Predicted Gene

Lj5g3v1696940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1696940.1 Non Chatacterized Hit- tr|A5BZZ0|A5BZZ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.23,1e-17,seg,NULL,CUFF.55733.1
         (241 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g33620.1                                                       130   1e-30
Glyma20g33980.1                                                       125   5e-29

>Glyma10g33620.1 
          Length = 84

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 73/83 (87%), Gaps = 5/83 (6%)

Query: 164 NENQ---KHVVVLGGESKLKPK-GQMGKDSSNKKPRPLYNHYANGRGWWDHDMEGVDNEA 219
           NE+Q    +VVVLGG SKLKPK GQ+G D+SNK+PRP YNHYANGRGWWD+DMEGVDNE 
Sbjct: 2   NESQTARNNVVVLGGASKLKPKKGQIGNDTSNKRPRPHYNHYANGRGWWDYDMEGVDNEE 61

Query: 220 LGFT-EVWEGVGSTTLGGIVDWH 241
           LGF+ EVWEGVGSTTLGGIVDWH
Sbjct: 62  LGFSDEVWEGVGSTTLGGIVDWH 84


>Glyma20g33980.1 
          Length = 108

 Score =  125 bits (313), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 61/77 (79%), Positives = 69/77 (89%), Gaps = 2/77 (2%)

Query: 167 QKHVVVLGGESKLKPK-GQMGKDSSNKKPRPLYNHYANGRGWWDHDMEGVDNEALGFT-E 224
           + +VVVLGG SKLKPK GQ+G D+SNKKPRP YNHYANG GWWD+DMEGVD+E LGF+ E
Sbjct: 32  RNNVVVLGGASKLKPKKGQIGNDTSNKKPRPHYNHYANGPGWWDYDMEGVDSEELGFSDE 91

Query: 225 VWEGVGSTTLGGIVDWH 241
           VWEGVGSTTLGGI+DWH
Sbjct: 92  VWEGVGSTTLGGIIDWH 108