Miyakogusa Predicted Gene

Lj5g3v1671380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1671380.1 tr|A9T2K5|A9T2K5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_167707,69.32,5e-19,zf-U1,Zinc finger, U1-C type;
ZF_MATRIN,Zinc finger, C2H2-type matrin; seg,NULL; C2H2 and C2HC zinc
,CUFF.55692.1
         (210 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g02680.1                                                       129   3e-30
Glyma02g17120.2                                                       129   3e-30
Glyma02g17120.1                                                       129   3e-30

>Glyma10g02680.1 
          Length = 206

 Score =  129 bits (323), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 60/73 (82%)

Query: 1  MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLXX 60
          MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1  MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 61 XXXXXXXXXXYNH 73
                    YNH
Sbjct: 61 AAAFQQVGVAYNH 73



 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 178 MVSSAMYQPNPSAPSSGGYDNYNANAQAPDGNH 210
           MVSSAMYQ NP APSSG YDNYN +AQAP+GNH
Sbjct: 174 MVSSAMYQANPPAPSSGSYDNYNTSAQAPEGNH 206


>Glyma02g17120.2 
          Length = 206

 Score =  129 bits (323), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 60/73 (82%)

Query: 1  MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLXX 60
          MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1  MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 61 XXXXXXXXXXYNH 73
                    YNH
Sbjct: 61 AAAFQQVGVAYNH 73



 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/33 (84%), Positives = 30/33 (90%)

Query: 178 MVSSAMYQPNPSAPSSGGYDNYNANAQAPDGNH 210
           MVSSAMYQ NP APSSG YDNYNA+AQAP+GNH
Sbjct: 174 MVSSAMYQANPPAPSSGSYDNYNASAQAPEGNH 206


>Glyma02g17120.1 
          Length = 206

 Score =  129 bits (323), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 60/73 (82%)

Query: 1  MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLXX 60
          MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1  MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 61 XXXXXXXXXXYNH 73
                    YNH
Sbjct: 61 AAAFQQVGVAYNH 73



 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/33 (84%), Positives = 30/33 (90%)

Query: 178 MVSSAMYQPNPSAPSSGGYDNYNANAQAPDGNH 210
           MVSSAMYQ NP APSSG YDNYNA+AQAP+GNH
Sbjct: 174 MVSSAMYQANPPAPSSGSYDNYNASAQAPEGNH 206