Miyakogusa Predicted Gene

Lj5g3v1669360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1669360.1 tr|B9I9X0|B9I9X0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_572749 PE=4
SV=1,54.61,2e-17,seg,NULL,CUFF.55686.1
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g17140.1                                                       120   4e-28
Glyma10g02650.1                                                       114   2e-26

>Glyma02g17140.1 
          Length = 139

 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/139 (48%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 1   MAPFWSFSAVLLALMAFTCPLALASQQKNMHVSTISAAPTTLPGCPL-LSPTLSPDIEPL 59
           MA FW F  + +A MA+ C    ++ +++MHVSTISAAPTTLPG PL  SPT+SPDIEPL
Sbjct: 1   MASFWPFLVMFMASMAYNCSSLASASRQSMHVSTISAAPTTLPGAPLYFSPTISPDIEPL 60

Query: 60  FPTPGKDAFXXXXXXXXXXXXXXXXXXXDITGHQGHGLXXXXXXXXXXXXXXXQGASLPL 119
           FPTPG+ AF                   D+T   G  L                GASLPL
Sbjct: 61  FPTPGRAAFSPSESSIPTIPSSPSPPNPDVTNSPGSVLAFPPSESMPAMAPSSHGASLPL 120

Query: 120 YSILQLVMLVICIMQLYGM 138
           YS+L L +LVICIMQL+GM
Sbjct: 121 YSVLHLAILVICIMQLHGM 139


>Glyma10g02650.1 
          Length = 140

 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/140 (48%), Positives = 82/140 (58%), Gaps = 2/140 (1%)

Query: 1   MAPFWSFSAVLLALMAFTCPLALASQQKNMHVSTISAAPTTLPGCPL-LSPTLSPDIEPL 59
           MA FW F A+ +ALMA  C    ++ +++MHVSTISAAPTTLPG PL  SPT+SPDIEPL
Sbjct: 1   MASFWPFLAMFMALMACNCSSLASASRQSMHVSTISAAPTTLPGAPLYYSPTMSPDIEPL 60

Query: 60  FPTPGKDAFXXXXXXXXXXXXXXXXXXXDITGHQGHGLXXXXXXXXXXXXXXXQGASLPL 119
           FPTPG  AF                   D+T   G  L               +GASLP+
Sbjct: 61  FPTPGGSAFSPSESSIPTIPSSPSPPNPDVTNSPGSVLAFPPSESMPAMAPSSKGASLPV 120

Query: 120 YSILQLVMLV-ICIMQLYGM 138
           YS+L L +LV ICIMQL+GM
Sbjct: 121 YSVLHLAILVIICIMQLHGM 140