Miyakogusa Predicted Gene

Lj5g3v1631040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1631040.1 Non Chatacterized Hit- tr|D8SPD6|D8SPD6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,53.25,6e-18,MutL_C,MutL, C-terminal, dimerisation;
DNA_mis_repair,DNA mismatch repair protein, C-terminal; DNA
M,CUFF.55655.1
         (669 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g17420.1                                                       967   0.0  
Glyma10g02390.1                                                       657   0.0  
Glyma01g36280.1                                                        67   7e-11
Glyma11g09160.1                                                        66   1e-10

>Glyma02g17420.1 
          Length = 938

 Score =  967 bits (2500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/681 (72%), Positives = 555/681 (81%), Gaps = 29/681 (4%)

Query: 1   MPKVGKLVNELYKSANSKQYPIAIMNFTVPTRAFDVNVTPDKRKIFFSEETALLQALREG 60
           MPKV KLVNELYK ANSKQYPIAI+NFTVPTR +DVNVTPDKRKIFFSEE A+LQALREG
Sbjct: 275 MPKVSKLVNELYKGANSKQYPIAILNFTVPTRVYDVNVTPDKRKIFFSEENAILQALREG 334

Query: 61  LQEIYSSSDVCYSVNEIMQPAVNEDCVELRSTKRKSLVVEKPPSLNDNVPQEEHYSECKN 120
           LQ+IYS+S+VCYSVNE+M PA  E+CVEL S+  KS +V K  S N + PQ+E  SE  N
Sbjct: 335 LQQIYSASNVCYSVNEVMLPAEKEECVELCSSHGKSPIVRKLYSPNASCPQKEQCSESNN 394

Query: 121 GITSHDEYNANCNKDSVSHIGHKEKHITDSKNASESVNDDQCSHSEEGLIHENDGSLMGQ 180
           G  S DE +  CN D++S   H+EKHITDSKNASES+N+ +               LM Q
Sbjct: 395 GSVSLDEIDTECNNDTISQDEHEEKHITDSKNASESINEYR---------------LMNQ 439

Query: 181 EFTLRAHTTSKDYNCRRRLECASSL---QGTLVSRAVESGGTSNQYSYSHSRHVQSTLNG 237
           EFTLRAH+ SKD +   R  C SS+   Q TLVSR VESG TS++YS++HSRHVQSTLN 
Sbjct: 440 EFTLRAHSASKDDDSGSRSACPSSIIPDQATLVSRTVESGSTSSKYSFNHSRHVQSTLNN 499

Query: 238 FVSVNKRNRDSSITALSEVPVLRNQASHYQLKTAKTETRDLITRSSVNFDQVGGTSKLSK 297
           FVSVNKRNRDS I ALSEVPVLRNQA H QLKTA TET+DLITRSS+ FDQ    ++ S+
Sbjct: 500 FVSVNKRNRDSVIRALSEVPVLRNQAPHCQLKTANTETQDLITRSSLCFDQSDEPARASE 559

Query: 298 IESLQQLKPDNILHINEYSVSLRGDTTDRE--SEMELDQENSASLADSAPATPSSNDLIN 355
           IESL+QL PDN+ + NE +VS +GD++ RE  S MELD +N+  L D+A  TPSS D+I 
Sbjct: 560 IESLKQLNPDNVFYKNENAVSFKGDSSVREPKSNMELDLKNNTPLGDTASITPSSIDMIT 619

Query: 356 TSEHVLVSDPPLHSSPVCLDSPKSSGQKICSNMHFSFQDLKNKREKRLSLMRSSKYKCGK 415
           T   VL SDPPLHSSPV L+S KSS  KICSNM FSFQ+LK +REKRLSL++SSK+ CGK
Sbjct: 620 TD--VLASDPPLHSSPVWLNSCKSSSNKICSNMQFSFQELKKRREKRLSLLQSSKFGCGK 677

Query: 416 ANVKSHYMAATLELSQPEIEQQKERILAAAATELERFFKKEDFSRMKVIGQFNLGFIIGK 475
           A VKSHY AATLE+ Q EI +QKER LAAAATELERFFKKEDFSRMKVIGQFNLGFII K
Sbjct: 678 AKVKSHYSAATLEILQSEIGEQKERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICK 737

Query: 476 LDHDLFIVDQHAADEKYNFERLSQSTILNQQPLIRPIRLELSPEEEIVASMHMDIIRKNG 535
           LD DLFIVDQHAADEKYNFERLSQSTILNQQPL+RPI+LELSPEEEIVASMHMDIIRKNG
Sbjct: 738 LDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMDIIRKNG 797

Query: 536 FTLEEDPNAPPGCRYKLKSVPFSKNTMFGIE-------DVKELISSLSDGDGDVECSTIG 588
           FTLEEDPNAPPGCR+KLKSVPFSKNTMFGIE       DVKELIS LSDGDG VECS +G
Sbjct: 798 FTLEEDPNAPPGCRFKLKSVPFSKNTMFGIEGRKSICIDVKELISILSDGDGHVECSIVG 857

Query: 589 SYKTDTSDSICPSRVRAMLASRACRSSIMIGDALGRNEMQKVVEHLAGLKSPWNCPHGRP 648
           SYK DTSDS+CPSRVRAMLASRACRSSIM+GDALGRNEMQK++EH+A LKSPWNCPHGRP
Sbjct: 858 SYKLDTSDSVCPSRVRAMLASRACRSSIMVGDALGRNEMQKILEHMAELKSPWNCPHGRP 917

Query: 649 TMRHLVDLTKLHQMSEQPMQM 669
           TMRHLVDLTK+H+  E  MQM
Sbjct: 918 TMRHLVDLTKIHKSYELTMQM 938


>Glyma10g02390.1 
          Length = 709

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/482 (72%), Positives = 382/482 (79%), Gaps = 44/482 (9%)

Query: 206 QGTLVSRAVESGGTSNQYSYSHSRHVQSTLNGFVSVNKRNRDSSITALSEVPVLRNQASH 265
           Q TLVSR VESG +S++YS++HSRHVQSTLN FVSVNKRNRDS I ALSEVPVLRN   H
Sbjct: 250 QTTLVSRTVESGSSSSKYSFNHSRHVQSTLNNFVSVNKRNRDSVIRALSEVPVLRN--PH 307

Query: 266 YQLKTAKTETRDLITRSSVNFDQVGGTSKLSKIESLQQLKPDNILHINEYSVSLRGDTTD 325
            QLKTA TET DLITRSS+ FDQ    ++ S+IE+L+QL PDN+ H NE SVS +GDT  
Sbjct: 308 CQLKTANTETHDLITRSSLCFDQCDELARASEIEALKQLNPDNVFHKNENSVSFKGDT-- 365

Query: 326 RESEMELDQENSASLADSAPATPSSNDLINTSEHVLVSDPPLHSSPVCLDSPKSSGQKIC 385
                             A   PSS D+I  +  V  SDPPLHSS V LDS KSS +KIC
Sbjct: 366 ------------------ASINPSSIDMI--TADVFASDPPLHSSSVRLDSSKSSRKKIC 405

Query: 386 SNMHFSFQDLKNKREKRLSLMRSSKYKCGKANVKSH-------YMAATLELSQPEIEQQK 438
           SNM FSFQ+LK +REKRLSL++SSK+ CGKA VK         Y  ATLELS+ EI +QK
Sbjct: 406 SNMQFSFQELKKRREKRLSLLQSSKFGCGKAKVKRFLFLYPFCYSDATLELSRSEIAEQK 465

Query: 439 ERILAAAATELERFFKKEDFSRMKVIGQFNLGFIIGKLDHDLFIVDQHAADEKYNFERLS 498
           ER LAAAATELERFFKKEDFSRMKVIGQFNLGFII KLD DLFIVDQHAADEKYNFERLS
Sbjct: 466 ERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLS 525

Query: 499 QSTILNQQPLIRPIRLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCRYKLKSVPFS 558
           QSTILNQQPL+RPI+LELSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCR+KLKSVPFS
Sbjct: 526 QSTILNQQPLLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCRFKLKSVPFS 585

Query: 559 KNTMFGIED-------------VKELISSLSDGDGDVECSTIGSYKTDTSDSICPSRVRA 605
           KNTMFGIE              VKELIS LSDGDG VECS +GSYK DTSDS+CPSRVRA
Sbjct: 586 KNTMFGIEGSYWRHPQLTYDTYVKELISILSDGDGHVECSIVGSYKLDTSDSVCPSRVRA 645

Query: 606 MLASRACRSSIMIGDALGRNEMQKVVEHLAGLKSPWNCPHGRPTMRHLVDLTKLHQMSEQ 665
           MLASRACRSSIM+GDALGRNEMQK++EH+A LKSPWNCPHGRPTMRHLVDLTK+H  SE 
Sbjct: 646 MLASRACRSSIMVGDALGRNEMQKILEHMAELKSPWNCPHGRPTMRHLVDLTKIHTSSEL 705

Query: 666 PM 667
            M
Sbjct: 706 TM 707



 Score =  156 bits (395), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 83/95 (87%)

Query: 1   MPKVGKLVNELYKSANSKQYPIAIMNFTVPTRAFDVNVTPDKRKIFFSEETALLQALREG 60
           MPKV K+VNELY+ ANSKQYPI I+NFTVPTR +DVNVTPDKRKIFFSEE ALLQALREG
Sbjct: 125 MPKVSKVVNELYRGANSKQYPIVILNFTVPTRTYDVNVTPDKRKIFFSEENALLQALREG 184

Query: 61  LQEIYSSSDVCYSVNEIMQPAVNEDCVELRSTKRK 95
           LQ+IYS+S+VCYSVNE++ PA  E CVEL S+  K
Sbjct: 185 LQQIYSASNVCYSVNEVVLPAEKEACVELCSSHGK 219


>Glyma01g36280.1 
          Length = 1006

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 33/210 (15%)

Query: 462 KVIGQFNLGFIIGKLDHDLFIVDQHAADEKYNFERLSQSTILNQQPLIRPIRLELSPEEE 521
           KV+ Q +  FI       L ++DQHAADE+   E L Q  +    P I   +L  S  E+
Sbjct: 779 KVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVL----PEI-GYQLLHSYSEQ 833

Query: 522 I-----VASMHMDIIRKNGFTLEEDPNAPPGCRYKLKSVP--FSKNTMFGIE----DVKE 570
           I     + ++H        F    D    P     L +V   FS   + G++    D+ E
Sbjct: 834 IKDWGWICNIHAQ--NSESFRRSLDILNRPQMAVTLIAVNTFFSVPCILGVKLNDVDLLE 891

Query: 571 LISSLSDGDGDVECSTIGSYKTDTSDSICPSRVRAMLASRACRSSIMIGDALGRNEMQKV 630
            +  L+D DG              S +I PS +R +L  +ACR +IM GD+L  +E   +
Sbjct: 892 FLQQLADTDG--------------SSTIPPSVLR-VLNLKACRGAIMFGDSLLPSECSLI 936

Query: 631 VEHLAGLKSPWNCPHGRPTMRHLVDLTKLH 660
           VE L      + C HGRPT   LV+L  LH
Sbjct: 937 VEELKHTSLCFQCAHGRPTTVPLVNLEALH 966


>Glyma11g09160.1 
          Length = 895

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 52/222 (23%)

Query: 462 KVIGQFNLGFIIGKLDHDLFIVDQHAADEKYNFERLSQST------------ILNQQPLI 509
           KV+ Q +  FI+      L ++DQHAADE+   E L Q              ++N   +I
Sbjct: 663 KVLHQVDKKFILVVAGRTLAVIDQHAADERIRLEELCQKVNFFILIMYCRRLVINYFIVI 722

Query: 510 ----------RPIRLE-LSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCRYKLKSVPFS 558
                      P  L+ L+P E I   +     R+ G+  +        CR KL  V   
Sbjct: 723 VKRLKTGAESAPFMLKILNPLEGIPLWLP---CREFGYPQQTTNGRHTYCRVKLNDV--- 776

Query: 559 KNTMFGIEDVKELISSLSDGDGDVECSTIGSYKTDTSDSICPSRVRAMLASRACRSSIMI 618
                   D+ E +  ++D DG              S ++ PS +R +L  +ACR +IM 
Sbjct: 777 --------DLLEFLQQVADTDG--------------SSTMPPSVLR-VLNLKACRGAIMF 813

Query: 619 GDALGRNEMQKVVEHLAGLKSPWNCPHGRPTMRHLVDLTKLH 660
           GD+L  +E   +VE L      + C HGRP    LV+L  LH
Sbjct: 814 GDSLLPSECSFIVEELKHTSLCFQCAHGRPATVPLVNLEALH 855