Miyakogusa Predicted Gene

Lj5g3v1631030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1631030.1 Non Chatacterized Hit- tr|A5APC0|A5APC0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,85.71,0,no
description,NULL; LSM,Ribonucleoprotein LSM domain; SMALL NUCLEAR
RIBONUCLEOPROTEIN SM,NULL; snRN,CUFF.55657.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g37170.3                                                       187   2e-48
Glyma02g17430.2                                                       183   6e-47
Glyma02g17430.1                                                       182   7e-47
Glyma10g02380.1                                                       182   8e-47
Glyma03g37170.2                                                       181   1e-46
Glyma19g39780.1                                                       181   2e-46
Glyma03g37170.1                                                       181   2e-46
Glyma05g31950.2                                                        57   6e-09
Glyma08g15260.1                                                        57   6e-09
Glyma05g31950.1                                                        57   6e-09

>Glyma03g37170.3 
          Length = 128

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/92 (94%), Positives = 89/92 (96%)

Query: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECY 60
          MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK+G  FWRMPECY
Sbjct: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 61 IRGNTIKYLRVPDEVIDKVQEETKTRTDRKPP 92
          IRGNTIKYLRVPDEVIDKVQEETK+R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPP 92


>Glyma02g17430.2 
          Length = 147

 Score =  183 bits (464), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 86/90 (95%), Positives = 88/90 (97%)

Query: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECY 60
          MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK+G  FWRMPECY
Sbjct: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 61 IRGNTIKYLRVPDEVIDKVQEETKTRTDRK 90
          IRGNTIKYLRVPDEVIDKVQEETK+RTDRK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRTDRK 90


>Glyma02g17430.1 
          Length = 149

 Score =  182 bits (463), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 86/90 (95%), Positives = 88/90 (97%)

Query: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECY 60
          MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK+G  FWRMPECY
Sbjct: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 61 IRGNTIKYLRVPDEVIDKVQEETKTRTDRK 90
          IRGNTIKYLRVPDEVIDKVQEETK+RTDRK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRTDRK 90


>Glyma10g02380.1 
          Length = 149

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 86/90 (95%), Positives = 88/90 (97%)

Query: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECY 60
          MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK+G  FWRMPECY
Sbjct: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 61 IRGNTIKYLRVPDEVIDKVQEETKTRTDRK 90
          IRGNTIKYLRVPDEVIDKVQEETK+RTDRK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRTDRK 90


>Glyma03g37170.2 
          Length = 144

 Score =  181 bits (460), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 85/90 (94%), Positives = 87/90 (96%)

Query: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECY 60
          MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK+G  FWRMPECY
Sbjct: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 61 IRGNTIKYLRVPDEVIDKVQEETKTRTDRK 90
          IRGNTIKYLRVPDEVIDKVQEETK+R DRK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRK 90


>Glyma19g39780.1 
          Length = 148

 Score =  181 bits (460), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 85/90 (94%), Positives = 87/90 (96%)

Query: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECY 60
          MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK+G  FWRMPECY
Sbjct: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 61 IRGNTIKYLRVPDEVIDKVQEETKTRTDRK 90
          IRGNTIKYLRVPDEVIDKVQEETK+R DRK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRK 90


>Glyma03g37170.1 
          Length = 148

 Score =  181 bits (460), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 85/90 (94%), Positives = 87/90 (96%)

Query: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECY 60
          MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK+G  FWRMPECY
Sbjct: 1  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 61 IRGNTIKYLRVPDEVIDKVQEETKTRTDRK 90
          IRGNTIKYLRVPDEVIDKVQEETK+R DRK
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRK 90


>Glyma05g31950.2 
          Length = 117

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)

Query: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECYI 61
          +P+ LL  A GH + VELK+GE Y G ++ C+   N  L  +  T+K+G    ++   +I
Sbjct: 7  IPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKT-SQLEHVFI 65

Query: 62 RGNTIKYLRVPD 73
          RG+ ++++ +PD
Sbjct: 66 RGSKVRFMVIPD 77


>Glyma08g15260.1 
          Length = 131

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECYI 61
          +P+ LL  A GH + VELK+GE Y G ++ C+   N  L  +  T+K+G +  ++   +I
Sbjct: 7  IPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65

Query: 62 RGNTIKYLRVPD 73
          RG+ ++++ +PD
Sbjct: 66 RGSKVRFMVIPD 77


>Glyma05g31950.1 
          Length = 131

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKEGTEFWRMPECYI 61
          +P+ LL  A GH + VELK+GE Y G ++ C+   N  L  +  T+K+G +  ++   +I
Sbjct: 7  IPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65

Query: 62 RGNTIKYLRVPD 73
          RG+ ++++ +PD
Sbjct: 66 RGSKVRFMVIPD 77