Miyakogusa Predicted Gene

Lj5g3v1627950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1627950.1 tr|B6U636|B6U636_MAIZE Catalytic/ oxidoreductase,
acting on NADH or NADPH OS=Zea mays PE=4
SV=1,51.04,1e-17,Complex1_LYR,Complex 1 LYR protein;
coiled-coil,NULL,CUFF.55641.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g02310.1                                                       177   3e-45
Glyma02g02180.2                                                       171   2e-43
Glyma02g02180.1                                                       171   2e-43

>Glyma10g02310.1 
          Length = 106

 Score =  177 bits (448), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/106 (80%), Positives = 96/106 (90%)

Query: 3   MARGEVLSAYRAVLKATRKTFAGDGVMLKGSAAEVRKKFEENRNVSSEEEIQKLLGEASE 62
           M RG+VLSAYRA+LKATRKTF+GD +MLK SA EVRKKFEEN+NVSSE EIQKLL EA E
Sbjct: 1   MGRGQVLSAYRALLKATRKTFSGDTMMLKESAVEVRKKFEENKNVSSEAEIQKLLLEAEE 60

Query: 63  ASHFITNMLVQAQLNSDAGSYVMKPGKEHAGATLEIPTEEIIRKSS 108
           ASHFITNMLVQAQLN D+G+Y +KP KEHAGATLE+P+EEIIRKS+
Sbjct: 61  ASHFITNMLVQAQLNPDSGTYAVKPCKEHAGATLELPSEEIIRKSA 106


>Glyma02g02180.2 
          Length = 106

 Score =  171 bits (432), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/105 (77%), Positives = 96/105 (91%)

Query: 3   MARGEVLSAYRAVLKATRKTFAGDGVMLKGSAAEVRKKFEENRNVSSEEEIQKLLGEASE 62
           MARG+VLSAYRA+LKATRK+F+GD +MLK SA EVR KFEEN++VSS+ EIQKLL EA E
Sbjct: 1   MARGQVLSAYRALLKATRKSFSGDTMMLKESALEVRNKFEENKSVSSQAEIQKLLLEAEE 60

Query: 63  ASHFITNMLVQAQLNSDAGSYVMKPGKEHAGATLEIPTEEIIRKS 107
           ASHFIT M+VQAQLN D+G+Y++KPGKEHAGATLE+P+EEIIRKS
Sbjct: 61  ASHFITTMIVQAQLNPDSGTYLVKPGKEHAGATLELPSEEIIRKS 105


>Glyma02g02180.1 
          Length = 106

 Score =  171 bits (432), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/105 (77%), Positives = 96/105 (91%)

Query: 3   MARGEVLSAYRAVLKATRKTFAGDGVMLKGSAAEVRKKFEENRNVSSEEEIQKLLGEASE 62
           MARG+VLSAYRA+LKATRK+F+GD +MLK SA EVR KFEEN++VSS+ EIQKLL EA E
Sbjct: 1   MARGQVLSAYRALLKATRKSFSGDTMMLKESALEVRNKFEENKSVSSQAEIQKLLLEAEE 60

Query: 63  ASHFITNMLVQAQLNSDAGSYVMKPGKEHAGATLEIPTEEIIRKS 107
           ASHFIT M+VQAQLN D+G+Y++KPGKEHAGATLE+P+EEIIRKS
Sbjct: 61  ASHFITTMIVQAQLNPDSGTYLVKPGKEHAGATLELPSEEIIRKS 105