Miyakogusa Predicted Gene

Lj5g3v1627890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1627890.1 Non Chatacterized Hit- tr|I3SBV7|I3SBV7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,99.13,0,seg,NULL;
Ribosomal_L22e,Ribosomal protein L22e; 60S RIBOSOMAL PROTEIN
L22,Ribosomal protein L22e,CUFF.55660.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g02140.1                                                       189   4e-49
Glyma10g02270.1                                                       188   1e-48
Glyma10g29200.1                                                       180   4e-46
Glyma20g38080.2                                                       179   9e-46
Glyma20g38080.1                                                       179   9e-46
Glyma19g42090.1                                                       170   3e-43
Glyma03g39480.2                                                       167   2e-42
Glyma03g39480.1                                                       167   2e-42
Glyma09g16550.1                                                       111   1e-25
Glyma09g16610.1                                                        97   4e-21
Glyma03g23430.1                                                        60   5e-10
Glyma20g16830.1                                                        48   3e-06

>Glyma02g02140.1 
          Length = 119

 Score =  189 bits (481), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 94/115 (81%), Positives = 98/115 (85%)

Query: 1   MSGAKGKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSK 60
           MSGAKGKKK  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS+TV+R+KSK
Sbjct: 1   MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTRDKSK 60

Query: 61  IPVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
           I VTSDSNFS              HNVRDWLRVIASNK+RNVYELRYFNIAENEG
Sbjct: 61  ITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAENEG 115


>Glyma10g02270.1 
          Length = 119

 Score =  188 bits (477), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/115 (80%), Positives = 98/115 (85%)

Query: 1   MSGAKGKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSK 60
           MSGAKGKKK  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS+TV+R+KSK
Sbjct: 1   MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTRDKSK 60

Query: 61  IPVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
           I VTSDSNFS              HNVRDWLRVIASNK+R+VYELRYFNIAENEG
Sbjct: 61  ITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERSVYELRYFNIAENEG 115


>Glyma10g29200.1 
          Length = 124

 Score =  180 bits (456), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 94/114 (82%)

Query: 2   SGAKGKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKI 61
           + AKGKKK  +F IDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS+TV REK+KI
Sbjct: 7   TAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVVREKTKI 66

Query: 62  PVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
            VTSDSNFS              HNVRDWLRVIASNKDR++YELRYFNIAENEG
Sbjct: 67  IVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120


>Glyma20g38080.2 
          Length = 124

 Score =  179 bits (453), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 86/114 (75%), Positives = 94/114 (82%)

Query: 2   SGAKGKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKI 61
           + AKGKKK  +F IDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL D++TV+REK+KI
Sbjct: 7   TAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALADTITVTREKTKI 66

Query: 62  PVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
            VTSDSNFS              HNVRDWLRVIASNKDR++YELRYFNIAENEG
Sbjct: 67  IVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120


>Glyma20g38080.1 
          Length = 124

 Score =  179 bits (453), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 86/114 (75%), Positives = 94/114 (82%)

Query: 2   SGAKGKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKI 61
           + AKGKKK  +F IDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL D++TV+REK+KI
Sbjct: 7   TAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALADTITVTREKTKI 66

Query: 62  PVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
            VTSDSNFS              HNVRDWLRVIASNKDR++YELRYFNIAENEG
Sbjct: 67  IVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120


>Glyma19g42090.1 
          Length = 125

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/104 (79%), Positives = 88/104 (84%)

Query: 12  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKIPVTSDSNFSX 71
           +F IDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS+TV+REK+KI VTSDSNFS 
Sbjct: 18  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTREKTKIIVTSDSNFSK 77

Query: 72  XXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
                        HNVRDWLRVIASNKDR+VYELRYFNIAENEG
Sbjct: 78  RYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEG 121


>Glyma03g39480.2 
          Length = 124

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/104 (78%), Positives = 87/104 (83%)

Query: 12  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKIPVTSDSNFSX 71
           +F IDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV+REK+KI +TSD NFS 
Sbjct: 17  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKIILTSDCNFSK 76

Query: 72  XXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
                        HNVRDWLRVIASNKDR+VYELRYFNIAENEG
Sbjct: 77  RYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEG 120


>Glyma03g39480.1 
          Length = 124

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/104 (78%), Positives = 87/104 (83%)

Query: 12  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKIPVTSDSNFSX 71
           +F IDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV+REK+KI +TSD NFS 
Sbjct: 17  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKIILTSDCNFSK 76

Query: 72  XXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIAENEG 115
                        HNVRDWLRVIASNKDR+VYELRYFNIAENEG
Sbjct: 77  RYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEG 120


>Glyma09g16550.1 
          Length = 67

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/65 (86%), Positives = 60/65 (92%)

Query: 6  GKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKIPVTS 65
          GKKKA SFVIDCAK VEDKIMDI SLEKFLQ+RIKVG KAGALGDS+TV+R+KSKI VTS
Sbjct: 1  GKKKAASFVIDCAKLVEDKIMDIVSLEKFLQDRIKVGDKAGALGDSITVTRDKSKIIVTS 60

Query: 66 DSNFS 70
          DSNFS
Sbjct: 61 DSNFS 65


>Glyma09g16610.1 
          Length = 58

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 53/57 (92%)

Query: 5  KGKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKI 61
          KGKKK  SFVIDCAKPVEDKIMDIASLEKFL++RIKVG KA ALGDS+T++R+KSKI
Sbjct: 1  KGKKKGASFVIDCAKPVEDKIMDIASLEKFLRDRIKVGDKASALGDSITITRDKSKI 57


>Glyma03g23430.1 
          Length = 51

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 36/41 (87%)

Query: 30 SLEKFLQERIKVGGKAGALGDSVTVSREKSKIPVTSDSNFS 70
          SLEKFLQERIKV  KAGALG+S++++++KS   VTSDSNFS
Sbjct: 8  SLEKFLQERIKVDDKAGALGNSISITKDKSNNTVTSDSNFS 48


>Glyma20g16830.1 
          Length = 93

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 10/65 (15%)

Query: 6  GKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKIPVTS 65
          G ++  SFVI+C K VEDK      +            K G+LGDS+T++R++SKI VTS
Sbjct: 12 GGQEGASFVINCVKLVEDKKGKKKKVGS----------KTGSLGDSITITRDRSKITVTS 61

Query: 66 DSNFS 70
          D+NFS
Sbjct: 62 DNNFS 66