Miyakogusa Predicted Gene
- Lj5g3v1616850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1616850.1 tr|Q9FSQ5|Q9FSQ5_ORYSA H0423H10.8 protein
OS=Oryza sativa GN=H0423H10.8 PE=4
SV=2,75,2e-19,CAMSAP_CH,Calmodulin-regulated spectrin-associated
protein, CH domain; MICROTUBULE-ASSOCIATED PROTEI,CUFF.55633.1
(108 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g10720.2 108 1e-24
Glyma06g20550.1 108 2e-24
Glyma17g10720.1 108 2e-24
Glyma04g33890.2 107 2e-24
Glyma04g33890.1 97 3e-21
Glyma11g05560.1 96 1e-20
Glyma01g39720.1 96 1e-20
>Glyma17g10720.2
Length = 237
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 57/70 (81%)
Query: 1 MLTTFILRIILVCSHIEEAASGDVQCQMIDMTHPRVVPMHKVNFDAKMEYDKIQNYKILQ 60
+LT R+ L S IEEAASG VQCQM+DMT P VVPMHKVNFDAK EYD IQNYKILQ
Sbjct: 19 ILTWINNRLHLNLSRIEEAASGAVQCQMMDMTFPGVVPMHKVNFDAKTEYDMIQNYKILQ 78
Query: 61 DVFNKLKIDK 70
DVFNKLKIDK
Sbjct: 79 DVFNKLKIDK 88
>Glyma06g20550.1
Length = 277
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%)
Query: 8 RIILVCSHIEEAASGDVQCQMIDMTHPRVVPMHKVNFDAKMEYDKIQNYKILQDVFNKLK 67
R+ L S IEEAASG VQCQM+DMT+P VVPMHKVNFDAK EYD IQNYK+LQDVFNKLK
Sbjct: 26 RLQLSLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLK 85
Query: 68 IDK 70
I+K
Sbjct: 86 IEK 88
>Glyma17g10720.1
Length = 275
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 57/70 (81%)
Query: 1 MLTTFILRIILVCSHIEEAASGDVQCQMIDMTHPRVVPMHKVNFDAKMEYDKIQNYKILQ 60
+LT R+ L S IEEAASG VQCQM+DMT P VVPMHKVNFDAK EYD IQNYKILQ
Sbjct: 19 ILTWINNRLHLNLSRIEEAASGAVQCQMMDMTFPGVVPMHKVNFDAKTEYDMIQNYKILQ 78
Query: 61 DVFNKLKIDK 70
DVFNKLKIDK
Sbjct: 79 DVFNKLKIDK 88
>Glyma04g33890.2
Length = 277
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%)
Query: 8 RIILVCSHIEEAASGDVQCQMIDMTHPRVVPMHKVNFDAKMEYDKIQNYKILQDVFNKLK 67
R+ L S IEEAASG VQCQM+DMT+P VVPMHKVNFDAK EYD IQNYK+LQDVFNKLK
Sbjct: 26 RLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLK 85
Query: 68 IDK 70
I+K
Sbjct: 86 IEK 88
>Glyma04g33890.1
Length = 278
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 49/53 (92%)
Query: 18 EAASGDVQCQMIDMTHPRVVPMHKVNFDAKMEYDKIQNYKILQDVFNKLKIDK 70
+AASG VQCQM+DMT+P VVPMHKVNFDAK EYD IQNYK+LQDVFNKLKI+K
Sbjct: 37 KAASGAVQCQMMDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK 89
>Glyma11g05560.1
Length = 329
Score = 95.5 bits (236), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 14 SHIEEAASGDVQCQMIDMTHPRVVPMHKVNFDAKMEYDKIQNYKILQDVFNKLKIDK 70
S +EEA SG V CQ++D HP +VPMHKVNFDAK EY+ IQNYK+LQDVFNKLKI K
Sbjct: 32 SKVEEACSGAVHCQLLDAAHPGIVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITK 88
>Glyma01g39720.1
Length = 327
Score = 95.5 bits (236), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 14 SHIEEAASGDVQCQMIDMTHPRVVPMHKVNFDAKMEYDKIQNYKILQDVFNKLKIDK 70
S +EEA SG V CQ++D HP +VPMHKVNFDAK EY+ IQNYK+LQDVFNKLKI K
Sbjct: 32 SKVEEACSGAVHCQLLDAAHPGIVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITK 88