Miyakogusa Predicted Gene

Lj5g3v1601830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1601830.1 CUFF.55585.1
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g01760.1                                                       313   1e-85
Glyma10g01830.1                                                       293   2e-79

>Glyma02g01760.1 
          Length = 225

 Score =  313 bits (803), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 171/229 (74%), Positives = 180/229 (78%), Gaps = 4/229 (1%)

Query: 1   MGSDSNLGGXXXXXXXXXXXXXKRTRDPEEEVYLDNLRSHKRYLSEIMASSLNGLTVGDS 60
           MGSDSNLGG             KRTRDPEEEVYLDNLRSHKRYLSEIMASSLNGLTVGDS
Sbjct: 1   MGSDSNLGGSPSASSPSA----KRTRDPEEEVYLDNLRSHKRYLSEIMASSLNGLTVGDS 56

Query: 61  LTDNLMESPARSESSFFLRDDMSLQYSPMSEDSDDSRFCETPLQSCSPQPDSIPSSPVSP 120
           L DNLMESPARSES F  RDDMSLQYSPMSEDSDD RFCETP+ SCS QPDS+PSSPVSP
Sbjct: 57  LPDNLMESPARSESMFSFRDDMSLQYSPMSEDSDDLRFCETPVHSCSSQPDSLPSSPVSP 116

Query: 121 YRHQRXXXXXXXXXXXXXXXIHGCTVSTSQPRQRSSDSEGRFPSSPSDICHSADLRRAAL 180
           +R+QR                +G T++  QPRQR SDSEGRFPSSPSDICHSADLRRAAL
Sbjct: 117 HRYQRPQNALPSAPSSSSNASYGSTIACPQPRQRGSDSEGRFPSSPSDICHSADLRRAAL 176

Query: 181 LRSVQMRTHPHGYASLELPFGSGQDPTPNIDTEERSCSYMKSLVDEGEY 229
           LRSVQMRT P G ASL+LPF S Q+  PNID EERSCSYMKSLVDE EY
Sbjct: 177 LRSVQMRTQPPGPASLDLPFVSNQESAPNIDPEERSCSYMKSLVDEREY 225


>Glyma10g01830.1 
          Length = 213

 Score =  293 bits (749), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/208 (75%), Positives = 166/208 (79%), Gaps = 1/208 (0%)

Query: 23  KRTRDPEEEVYLDNLRSHKRYLSEIMASSLNGLTVGDSLTDNLMESPARSESSFFLRDDM 82
           KRTRDPEEEVYLDNLRSHKRYLSEIMASSLNGLTVGDSL DNLM+SPARSES F  RDDM
Sbjct: 6   KRTRDPEEEVYLDNLRSHKRYLSEIMASSLNGLTVGDSLPDNLMDSPARSESMFSFRDDM 65

Query: 83  S-LQYSPMSEDSDDSRFCETPLQSCSPQPDSIPSSPVSPYRHQRXXXXXXXXXXXXXXXI 141
           S LQYSPMSEDSDD RFCETP+ SCS Q DS+PSSPVSP+R+QR                
Sbjct: 66  SFLQYSPMSEDSDDLRFCETPVHSCSSQLDSLPSSPVSPHRYQRPQNASSSAPSSSSNAS 125

Query: 142 HGCTVSTSQPRQRSSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTHPHGYASLELPFG 201
           H  TV+  QPRQR SDSEGRFPSSPSDICHSADLRRAALLRSVQMRT P   ASL+LPF 
Sbjct: 126 HVSTVTCPQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTQPPSPASLDLPFV 185

Query: 202 SGQDPTPNIDTEERSCSYMKSLVDEGEY 229
           S  +  PNID EERSC YMKSLVDE EY
Sbjct: 186 SNPESAPNIDPEERSCPYMKSLVDEREY 213