Miyakogusa Predicted Gene

Lj5g3v1600670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1600670.1 Non Chatacterized Hit- tr|C5WMI2|C5WMI2_SORBI
Putative uncharacterized protein Sb01g037590
OS=Sorghu,35.27,2e-17,coiled-coil,NULL; seg,NULL; DUF4228,Protein of
unknown function DUF4228,CUFF.55571.1
         (205 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g40310.1                                                       217   7e-57
Glyma10g01700.1                                                       211   3e-55
Glyma03g37720.1                                                       204   4e-53
Glyma02g01650.1                                                       194   7e-50
Glyma05g09230.1                                                        55   6e-08
Glyma10g41260.1                                                        54   1e-07
Glyma19g00790.1                                                        54   1e-07
Glyma20g25990.1                                                        53   2e-07

>Glyma19g40310.1 
          Length = 199

 Score =  217 bits (552), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 118/202 (58%), Positives = 142/202 (70%), Gaps = 10/202 (4%)

Query: 1   MGNQISLRPSDATCKIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQRRPTPLP 60
           MGNQI+    DAT KIV+WDGSV++FD+P+ VAELMLEHPQQVV++F   V ++RPTPLP
Sbjct: 1   MGNQIA---RDATGKIVYWDGSVQEFDEPLTVAELMLEHPQQVVLDFHSAVKEKRPTPLP 57

Query: 61  ADKKLDMNKVYLMVPMKRGKPVGLSCEESRRILLMVNSALHSKYLACSSGFMPRLPSLCQ 120
           AD+KL+M K Y+MVP+KRGKPV LS E+SRRILL+VNS+LHSKY   SSGF+P L  L  
Sbjct: 58  ADEKLEMKKTYVMVPVKRGKPVLLSSEDSRRILLIVNSSLHSKYFVSSSGFLPWLSRLFH 117

Query: 121 NTSIVEAGTGVGXXXXXXXXXXXXXXDQFAEILAEMSEG-RPEYLSLSRQLSGKEWKPSL 179
           +   V     V                 F+E L EM EG RPEY  +SRQLSGK WKPSL
Sbjct: 118 SEGEV---VSVLQRKEEVEVENTVERYGFSEFLPEMIEGSRPEY--MSRQLSGKGWKPSL 172

Query: 180 DTIKEKNIEKKPSHW-LFVKSF 200
           DTIKEK ++ K S W LF+K F
Sbjct: 173 DTIKEKKVKTKLSRWLLFLKGF 194


>Glyma10g01700.1 
          Length = 185

 Score =  211 bits (538), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/207 (56%), Positives = 147/207 (71%), Gaps = 29/207 (14%)

Query: 1   MGNQ-ISLRPSDATCKIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQRRPTPL 59
           MGNQ +SLRPS+AT KI+ WDGSV + +Q + VAELMLEHP+QVVVE    V+ +RPTPL
Sbjct: 1   MGNQLVSLRPSEATGKIITWDGSVHEIEQSLTVAELMLEHPEQVVVELHSAVNNKRPTPL 60

Query: 60  PADKKLDMNKVYLMVPMKRGKPVGLSCEESRRILLMVNSAL-HSKYLA----CSSGFMPR 114
           PAD KL+ NKVYLM+P+KRGKPVGLS EE+RRILL++NSAL HSK L      SS F+P 
Sbjct: 61  PADNKLETNKVYLMLPLKRGKPVGLSGEETRRILLILNSALQHSKCLVGSSSSSSKFVPW 120

Query: 115 LPSLCQNTSIVEAGTGVGXXXXXXXXXXXXXXDQFAEILAEMSEG-RPEYLSLSRQLSGK 173
           L  LCQNT+ +                     +   +I  E++E  RPEY  L+RQ+SGK
Sbjct: 121 LTRLCQNTTTI--------------------VEPQRKINEEITEKRRPEY--LNRQVSGK 158

Query: 174 EWKPSLDTIKEKNIEKKPSHWLFVKSF 200
            WKP+LDTIKEKNI++K +HWLF+K+F
Sbjct: 159 GWKPTLDTIKEKNIDRKLTHWLFLKTF 185


>Glyma03g37720.1 
          Length = 199

 Score =  204 bits (520), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/202 (55%), Positives = 138/202 (68%), Gaps = 10/202 (4%)

Query: 1   MGNQISLRPSDATCKIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQRRPTPLP 60
           MGNQI+    DAT KIV+W+GSV++FD+P+ VAELMLEHPQQVV++F   V ++RPTPLP
Sbjct: 1   MGNQIA---RDATGKIVYWNGSVQEFDEPLTVAELMLEHPQQVVLDFHSAVKEKRPTPLP 57

Query: 61  ADKKLDMNKVYLMVPMKRGKPVGLSCEESRRILLMVNSALHSKYLACSSGFMPRLPSLCQ 120
           AD+KL+M K Y+MVP+KRGKPV LS E+SRRIL  VNS+LHS +   SSGF+P L  L  
Sbjct: 58  ADEKLEMKKTYVMVPVKRGKPVLLSSEDSRRILFTVNSSLHSNHFVSSSGFLPWLARLFH 117

Query: 121 NTSIVEAGTGVGXXXXXXXXXXXXXXDQFAEILAEMSEGR-PEYLSLSRQLSGKEWKPSL 179
               V A   V                 F+E L EM EG  PEY  +SRQLSGK WKPSL
Sbjct: 118 AKGEVVA---VLQRKEEVEKENTEERYGFSEFLPEMLEGSMPEY--MSRQLSGKGWKPSL 172

Query: 180 DTIKEKNIEKKPSHW-LFVKSF 200
           DTIKEK ++ K S W LF++ F
Sbjct: 173 DTIKEKKVKTKLSPWLLFLRGF 194


>Glyma02g01650.1 
          Length = 167

 Score =  194 bits (492), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 102/184 (55%), Positives = 127/184 (69%), Gaps = 18/184 (9%)

Query: 18  FWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQRRPTPLPADKKLDMNKVYLMVPMK 77
            WDGSV++ +QP+ VAELMLEHP+QVVVE    V Q+R TPLPAD KL+ NKVYLM+P+K
Sbjct: 1   MWDGSVQEIEQPLTVAELMLEHPEQVVVELHSAVKQKRATPLPADNKLETNKVYLMLPIK 60

Query: 78  RGKPVGLSCEESRRILLMVNSALHSKYLACSSGFMPRLPSLCQN-TSIVEAGTGVGXXXX 136
           RGKPVGLS E++RRILL++NSALH       S F+P L  LCQN T+IVE          
Sbjct: 61  RGKPVGLSGEDTRRILLILNSALH------HSKFVPWLTRLCQNTTTIVEP--------- 105

Query: 137 XXXXXXXXXXDQFAEILAEMSEGRPEYLSLSRQLSGKEWKPSLDTIKEKNIEKKPSHWLF 196
                     +       E+ EGRPEY  L+RQ+SGK WKP+LDTIKE NI++K +HWLF
Sbjct: 106 QRKEITKQEQESCQLFFPEILEGRPEY--LNRQVSGKGWKPTLDTIKENNIDRKLTHWLF 163

Query: 197 VKSF 200
           +K+F
Sbjct: 164 LKTF 167


>Glyma05g09230.1 
          Length = 161

 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 1  MGNQISLRPSDATC-------KIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQ 53
          MGN IS   S A         K++F  G + + ++ V  AELMLE P   VV+ +     
Sbjct: 1  MGNYISCTLSTAGSSKHWRGIKVIFPSGEIEQLEEGVKAAELMLEMPSFFVVDTRSLQIG 60

Query: 54 RRPTPLPADKKLDMNKVYLMVPMKR 78
          RR + L AD++L+   VY+M+PMKR
Sbjct: 61 RRFSALNADEELECGNVYVMLPMKR 85


>Glyma10g41260.1 
          Length = 180

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 8/85 (9%)

Query: 1  MGNQIS-------LRPSDATCKIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQ 53
          MGN +S       ++ S AT +++   G V++F + V  AELMLEHP   +V  +     
Sbjct: 1  MGNYVSCTLAPPLMKNSKAT-RVIIPTGEVKQFKEIVKAAELMLEHPNYFLVNSRSLHIG 59

Query: 54 RRPTPLPADKKLDMNKVYLMVPMKR 78
          RR + L AD++L+   VY+  PM+R
Sbjct: 60 RRFSALGADEELEFGNVYIFFPMRR 84


>Glyma19g00790.1 
          Length = 162

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 8/86 (9%)

Query: 1  MGNQISLRPSDAT--------CKIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVS 52
          MGN IS   S A          K++F  G + K ++ V  AELMLE P   VV  +    
Sbjct: 1  MGNYISCTLSTAGSRKLHWRGIKVIFPSGEIEKLEEGVKAAELMLEMPSFFVVNTRSLKI 60

Query: 53 QRRPTPLPADKKLDMNKVYLMVPMKR 78
            R + L AD++L+   VY+MVPMKR
Sbjct: 61 GGRFSALNADEELECGYVYVMVPMKR 86


>Glyma20g25990.1 
          Length = 177

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 1   MGNQIS-------LRPSDATCKIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQ 53
           MGN +S       ++ S AT +++   G V++F + V  AELMLEHP   +V  +     
Sbjct: 1   MGNYVSCTLAPPLMKNSKAT-RVIIPTGEVKQFREIVKAAELMLEHPSYFLVNSRSLHIG 59

Query: 54  RRPTPLPADKKLDMNKVYLMVPMKRGKPVGLSCEESRRILLMVNSALHSKYLACSSGFMP 113
           RR + L AD++L+   VY+  PM+R   V ++  +   + L  NSA  +K L  S G   
Sbjct: 60  RRFSALGADEELESGNVYIFFPMRRVNSV-VTPTDMAVLFLAANSA--AKRL--SGGKAR 114

Query: 114 RLPSLCQ 120
            LP  C 
Sbjct: 115 VLPDNCD 121