Miyakogusa Predicted Gene

Lj5g3v1563140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1563140.1 tr|Q0PJK7|Q0PJK7_SOYBN MYB transcription factor
MYB76 OS=Glycine max GN=MYB76 PE=2 SV=1,48.15,0.00000000003,
,CUFF.55528.1
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g01300.1                                                        73   9e-14
Glyma19g40650.1                                                        59   1e-09

>Glyma02g01300.1 
          Length = 260

 Score = 72.8 bits (177), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 66/108 (61%), Gaps = 25/108 (23%)

Query: 1   MPRLMERINASTGGSSNDQTTFCSNTQAHSDSCVMANPQMLLEVSSYSSGVENVQPPSLS 60
           MPRLME+I AS+     DQTT C NTQ H D+ +         VSSYSS V+ +QPPSLS
Sbjct: 142 MPRLMEQIQASSSSYGLDQTTLC-NTQTHRDNSM---------VSSYSSEVD-LQPPSLS 190

Query: 61  ESSV---SYNLMGGAGSNNWSPDSAEMG-------QFNYSDNMQAFEP 98
           ++S+   SYNL+G  G    S +SAE G        ++YSD +QAFEP
Sbjct: 191 DTSITSSSYNLIGDGGL---STESAEKGSIYSLWQHWDYSD-IQAFEP 234


>Glyma19g40650.1 
          Length = 250

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 11/80 (13%)

Query: 1   MPRLMERINASTGGSSN------DQTTFCSNTQAHSDSC--VMANPQMLLEVSSYSSGVE 52
           MPR++ERI A    SS+       QTT  SN QAHSD C  +  NP +L EVSS +    
Sbjct: 130 MPRMLERIQAQASSSSSSSSGQAHQTTLISNAQAHSDPCGVMTTNPSLLSEVSSSAL--- 186

Query: 53  NVQPPSLSESSVSYNLMGGA 72
           +   PSL +SS SYNLMGG 
Sbjct: 187 DAHAPSLYDSSASYNLMGGG 206