Miyakogusa Predicted Gene

Lj5g3v1536600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1536600.1 Non Chatacterized Hit- tr|D7LFX0|D7LFX0_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,45.6,3e-19,seg,NULL; FAMILY NOT
NAMED,NULL,NODE_27323_length_695_cov_7.166906.path1.1
         (186 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g41020.1                                                       152   2e-37
Glyma03g38420.1                                                       149   1e-36
Glyma02g00940.1                                                       115   2e-26
Glyma03g38420.2                                                       111   5e-25

>Glyma19g41020.1 
          Length = 243

 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/175 (57%), Positives = 116/175 (66%), Gaps = 24/175 (13%)

Query: 26  NELSGFCYHLNQT-------VKDSASDNEGQKTKKRRIRKETCMWNSSEKNRSNIDEKEE 78
           NEL  F Y L  T       VKD ASDN G +TKK   R+       S      +++K +
Sbjct: 79  NELGSF-YSLPSTPPRRRKQVKDYASDN-GNETKKSDPRRRR---RPSMMGFEGVEKKSK 133

Query: 79  EEHVVKGMRRESDRNGSTWVITRPKGGRRSLCMDLEEVKACKDLGFELE------VPSRL 132
            +   +G   ESD++G   +ITRPKGG RSLCMDLEEVKAC+DLGFELE      +PS L
Sbjct: 134 RKE--EGFSGESDQSG-LMLITRPKGGIRSLCMDLEEVKACRDLGFELEHERMLEIPSLL 190

Query: 133 SVSLSNSTLDTSSGGSSPITNWRISSPGDDPKDVKARLKMWAHVVA-ASASKYCT 186
           S   SNSTLDTSSG +SPITNWRISSPGDDP+DVKARLK+WA  VA ASASKY T
Sbjct: 191 S--FSNSTLDTSSGSNSPITNWRISSPGDDPRDVKARLKVWAQAVALASASKYGT 243


>Glyma03g38420.1 
          Length = 240

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/175 (54%), Positives = 113/175 (64%), Gaps = 23/175 (13%)

Query: 26  NELSGFCYHLNQT-------VKDSASDNEGQKTKKRRIRKETCMWNSSEKNRSNIDEKEE 78
           NEL G CY L  T       +KD ASDN  + T K   R+    +            ++E
Sbjct: 75  NEL-GSCYSLPSTPPRMRKQLKDYASDNGNEITNKSDPRRRRRSFRRERWGFEKTKIRKE 133

Query: 79  EEHVVKGMRRESDRNGSTWVITRPKGGRRSLCMDLEEVKACKDLGFELE------VPSRL 132
           E     G+  +SD++G   +ITRPKGG RSLCMDLEEVKAC+DLGFELE      +PSRL
Sbjct: 134 E-----GLSGDSDQSG-VMLITRPKGGIRSLCMDLEEVKACRDLGFELEHERMLEIPSRL 187

Query: 133 SVSLSNSTLDTSSGGSSPITNWRISSPGDDPKDVKARLKMWAHVVA-ASASKYCT 186
           S   SNSTLDTSSG +SPI NWRIS+PGDDP+DVKARLK+WA  VA ASASKY T
Sbjct: 188 S--FSNSTLDTSSGSNSPIANWRISAPGDDPRDVKARLKVWAQAVALASASKYGT 240


>Glyma02g00940.1 
          Length = 105

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/89 (73%), Positives = 69/89 (77%), Gaps = 12/89 (13%)

Query: 98  VITRPKGGRRSLCMDLEEVKACKDLGFELEVPSRLSVSLSNSTLDTSSGGSSPITNWRIS 157
           VITRPKGGRRSLCMDLEEVKAC+D          LS S SNSTLDTSSG +SPI    IS
Sbjct: 29  VITRPKGGRRSLCMDLEEVKACRD---------TLS-SFSNSTLDTSSGVTSPICC--IS 76

Query: 158 SPGDDPKDVKARLKMWAHVVAASASKYCT 186
           SPGDDPKDVKARLK+WA  VAASAS+Y T
Sbjct: 77  SPGDDPKDVKARLKLWAQAVAASASRYGT 105


>Glyma03g38420.2 
          Length = 216

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/148 (50%), Positives = 90/148 (60%), Gaps = 22/148 (14%)

Query: 26  NELSGFCYHLNQT-------VKDSASDNEGQKTKKRRIRKETCMWNSSEKNRSNIDEKEE 78
           NEL G CY L  T       +KD ASDN  + T K   R+    +            ++E
Sbjct: 75  NEL-GSCYSLPSTPPRMRKQLKDYASDNGNEITNKSDPRRRRRSFRRERWGFEKTKIRKE 133

Query: 79  EEHVVKGMRRESDRNGSTWVITRPKGGRRSLCMDLEEVKACKDLGFE------LEVPSRL 132
           E     G+  +SD++G   +ITRPKGG RSLCMDLEEVKAC+DLGFE      LE+PSRL
Sbjct: 134 E-----GLSGDSDQSG-VMLITRPKGGIRSLCMDLEEVKACRDLGFELEHERMLEIPSRL 187

Query: 133 SVSLSNSTLDTSSGGSSPITNWRISSPG 160
             S SNSTLDTSSG +SPI NWRIS+PG
Sbjct: 188 --SFSNSTLDTSSGSNSPIANWRISAPG 213