Miyakogusa Predicted Gene

Lj5g3v1533500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1533500.1 Non Chatacterized Hit- tr|I1JR03|I1JR03_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,65.12,2e-18,seg,NULL,CUFF.55469.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g28130.1                                                        78   2e-15
Glyma19g41170.1                                                        76   8e-15
Glyma03g38580.1                                                        75   2e-14
Glyma20g22140.1                                                        72   2e-13

>Glyma10g28130.1 
          Length = 105

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 52/69 (75%), Gaps = 2/69 (2%)

Query: 6  VNPSLFRSE-SLGHXXXXXXXXXXXXTMMEKRQLFLRSYQFCQKKSFTERIKGSLIRAKK 64
          +NP +FRSE   G+            TM+EKRQ+FLRSYQFC+KKSFTERIKGSL+RAKK
Sbjct: 1  MNP-VFRSEVPFGYYYYNNNYTEQNNTMLEKRQVFLRSYQFCRKKSFTERIKGSLVRAKK 59

Query: 65 VLWLRLWSS 73
          ++WLRL S+
Sbjct: 60 IVWLRLRSA 68


>Glyma19g41170.1 
          Length = 104

 Score = 76.3 bits (186), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 52/77 (67%), Gaps = 9/77 (11%)

Query: 6  VNPSLFRSESLGHXXXXXXXXXXXXTMMEKRQLFLRSYQFCQKKSFTERIKGSLIRAKKV 65
          +NP LFRSES G             TMMEKRQLFLRSY+FC+KKS  ER+KGSL+R KKV
Sbjct: 1  MNP-LFRSESFG------PESEHSHTMMEKRQLFLRSYRFCRKKSLKERVKGSLVRVKKV 53

Query: 66 LWLRLWSSSAGGFRKLV 82
          L LRL   SA   R+LV
Sbjct: 54 LLLRL--GSAMKLRRLV 68


>Glyma03g38580.1 
          Length = 81

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 13 SESLGHXXXXXXXXXXXXTMMEKRQLFLRSYQFCQKKSFTERIKGSLIRAKKVLWLRLWS 72
          S+S GH            TMMEKRQLFLRSYQFC+KKS  ER+KGSL+R KKVLWLRL S
Sbjct: 1  SDSFGHYYPEAEHSY---TMMEKRQLFLRSYQFCRKKSLKERVKGSLVRVKKVLWLRLRS 57

Query: 73 S 73
          +
Sbjct: 58 A 58


>Glyma20g22140.1 
          Length = 78

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 40/42 (95%)

Query: 32 MMEKRQLFLRSYQFCQKKSFTERIKGSLIRAKKVLWLRLWSS 73
          M+EKRQLFLRSYQFC+KKS TERIKGSL+RAKK++WLRL S+
Sbjct: 1  MVEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKIVWLRLRSA 42