Miyakogusa Predicted Gene

Lj5g3v1533380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1533380.1 tr|Q9W087|Q9W087_DROME CG2021 OS=Drosophila
melanogaster GN=CG2021 PE=2 SV=1,63.89,2e-19,no description,NULL;
LSM1,NULL; LSM,Ribonucleoprotein LSM domain; snRNP Sm
proteins,Ribonucleoprotei,CUFF.55445.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g40590.2                                                       142   7e-35
Glyma15g40590.1                                                       142   7e-35
Glyma08g18410.1                                                       142   7e-35
Glyma08g18410.2                                                       130   3e-31
Glyma07g04580.1                                                        63   9e-11
Glyma16g01160.1                                                        58   3e-09

>Glyma15g40590.2 
          Length = 98

 Score =  142 bits (359), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 74/79 (93%)

Query: 1  MSTGPGLESLVDQQISVITNDGRNIVGTLKGFDQATNIILDESHERVFSTKEGVQLIALG 60
          MS GPGLESLVDQ ISVITNDGRNIVG LKGFDQATNIILDESHERV+STKEGVQ + LG
Sbjct: 1  MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG 60

Query: 61 LYIIRGDNISVVGELDEDL 79
          LYIIRGDNISVVGELDE+L
Sbjct: 61 LYIIRGDNISVVGELDEEL 79


>Glyma15g40590.1 
          Length = 98

 Score =  142 bits (359), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 74/79 (93%)

Query: 1  MSTGPGLESLVDQQISVITNDGRNIVGTLKGFDQATNIILDESHERVFSTKEGVQLIALG 60
          MS GPGLESLVDQ ISVITNDGRNIVG LKGFDQATNIILDESHERV+STKEGVQ + LG
Sbjct: 1  MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG 60

Query: 61 LYIIRGDNISVVGELDEDL 79
          LYIIRGDNISVVGELDE+L
Sbjct: 61 LYIIRGDNISVVGELDEEL 79


>Glyma08g18410.1 
          Length = 98

 Score =  142 bits (359), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 74/79 (93%)

Query: 1  MSTGPGLESLVDQQISVITNDGRNIVGTLKGFDQATNIILDESHERVFSTKEGVQLIALG 60
          MS GPGLESLVDQ ISVITNDGRNIVG LKGFDQATNIILDESHERV+STKEGVQ + LG
Sbjct: 1  MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG 60

Query: 61 LYIIRGDNISVVGELDEDL 79
          LYIIRGDNISVVGELDE+L
Sbjct: 61 LYIIRGDNISVVGELDEEL 79


>Glyma08g18410.2 
          Length = 94

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/79 (84%), Positives = 71/79 (89%), Gaps = 4/79 (5%)

Query: 1  MSTGPGLESLVDQQISVITNDGRNIVGTLKGFDQATNIILDESHERVFSTKEGVQLIALG 60
          MS GPGLESLVD    +ITNDGRNIVG LKGFDQATNIILDESHERV+STKEGVQ + LG
Sbjct: 1  MSAGPGLESLVD----LITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG 56

Query: 61 LYIIRGDNISVVGELDEDL 79
          LYIIRGDNISVVGELDE+L
Sbjct: 57 LYIIRGDNISVVGELDEEL 75


>Glyma07g04580.1 
          Length = 128

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)

Query: 7  LESLVDQQISVITNDGRNIVGTLKGFDQATNIILDESHERVFSTKEGVQLIALGLYIIRG 66
          L S +D+++ V+  DGR ++GTL+ FDQ  N +L+ + ERV         I LGLY+IRG
Sbjct: 15 LASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRG 73

Query: 67 DNISVVGELD 76
          +N+ ++GELD
Sbjct: 74 ENVVLIGELD 83


>Glyma16g01160.1 
          Length = 110

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 13 QQISVITNDGRNIVGTLKGFDQATNIILDESHERVFSTKEGVQLIALGLYIIRGDNISVV 72
          +++ V+  DGR ++GTL+ FDQ  N +L+ + ERV         I LGLY+IRG+N+ ++
Sbjct: 3  EKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLI 61

Query: 73 GELD 76
          GELD
Sbjct: 62 GELD 65