Miyakogusa Predicted Gene

Lj5g3v1531230.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1531230.2 Non Chatacterized Hit- tr|I1NME4|I1NME4_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,36.24,1e-16,coiled-coil,NULL; seg,NULL,CUFF.55430.2
         (348 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g28460.1                                                       505   e-143
Glyma20g22510.1                                                       500   e-141
Glyma10g28460.2                                                       409   e-114
Glyma12g29690.1                                                        88   2e-17
Glyma09g11400.1                                                        58   1e-08

>Glyma10g28460.1 
          Length = 346

 Score =  505 bits (1300), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/334 (78%), Positives = 287/334 (85%)

Query: 15  VPARDVDPXXXXXXXXXQNFRRNVVSLAAELKELRGRLAAQEKSYAIETLTRQEAETNAK 74
           V AR+VDP         Q+FRRNVVSLA ELKELR RLA+QE+SYA ET TRQEAETNAK
Sbjct: 13  VAAREVDPLLQDLNEKKQSFRRNVVSLAVELKELRSRLASQEQSYAKETQTRQEAETNAK 72

Query: 75  SLELEIGRLQKNLDERNEQLQASASSAEKYLMELDDLKTQLVXXXXXXXXXXXXXXXXQL 134
           ++EL+IGRLQKNL+ERNEQLQASASSAEKYL ELDDL+TQLV                QL
Sbjct: 73  NMELQIGRLQKNLEERNEQLQASASSAEKYLKELDDLRTQLVTTRATADASAASAQSAQL 132

Query: 135 HCVELVKELDEKNSSLREHEDRVTRLAEQLENLQKDLQARESSQKHLKDEVFRIEHDIME 194
            C+ELVKEL+EKN SLREHEDRV RL EQL+NLQKDLQARESSQK LKDEV RIEHDIME
Sbjct: 133 QCLELVKELNEKNGSLREHEDRVLRLGEQLDNLQKDLQARESSQKQLKDEVLRIEHDIME 192

Query: 195 ALTKAGDNKDRELRKILDEVSPRNFEKMNKLLVVKDEEIVRMKDEIKIMSAHWKLKTKEL 254
           AL KAG+NK+ ELRKILDEVSP+NFEKMNK+L VKD+EI ++KDEIKIMSAHWKLKTKEL
Sbjct: 193 ALAKAGENKNCELRKILDEVSPKNFEKMNKILGVKDDEIAKLKDEIKIMSAHWKLKTKEL 252

Query: 255 ESQLEKQRRADQELKKKVLKLEFCLQETRSQTRKLQRMGERRDKAIKELRDQLAAKRKRG 314
           ESQLEKQRRADQELKKKVLKLEFCLQE RSQTRKLQRMGERRDKAIKELRDQLAAK++R 
Sbjct: 253 ESQLEKQRRADQELKKKVLKLEFCLQEARSQTRKLQRMGERRDKAIKELRDQLAAKQQRE 312

Query: 315 VAAEEKQQQNFWDTSGFKIVVSMSMLVLVAFSKR 348
           VAA +K  QNFWDTSGFK+VVSMSML+LV FS+R
Sbjct: 313 VAAADKLNQNFWDTSGFKMVVSMSMLILVVFSRR 346


>Glyma20g22510.1 
          Length = 345

 Score =  500 bits (1287), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/334 (76%), Positives = 282/334 (84%)

Query: 15  VPARDVDPXXXXXXXXXQNFRRNVVSLAAELKELRGRLAAQEKSYAIETLTRQEAETNAK 74
           + AR+ DP         Q+FRRNVVSLA ELKELR RLA+QE+SYA ETLTRQEAETNAK
Sbjct: 12  IAAREADPVLQDLNEKKQSFRRNVVSLAVELKELRSRLASQEQSYAKETLTRQEAETNAK 71

Query: 75  SLELEIGRLQKNLDERNEQLQASASSAEKYLMELDDLKTQLVXXXXXXXXXXXXXXXXQL 134
           ++EL+IGRLQKNL+E+NEQLQAS SSAEKYL ELD+L+TQLV                QL
Sbjct: 72  NMELQIGRLQKNLEEKNEQLQASTSSAEKYLKELDELRTQLVATRATADASAASAQSAQL 131

Query: 135 HCVELVKELDEKNSSLREHEDRVTRLAEQLENLQKDLQARESSQKHLKDEVFRIEHDIME 194
            C+ELVKELDEKN SLREHEDRV RL EQL+NLQKDLQARESSQK LKDEV RIEHDIME
Sbjct: 132 QCLELVKELDEKNGSLREHEDRVLRLGEQLDNLQKDLQARESSQKQLKDEVLRIEHDIME 191

Query: 195 ALTKAGDNKDRELRKILDEVSPRNFEKMNKLLVVKDEEIVRMKDEIKIMSAHWKLKTKEL 254
           A  KAG+NK+ ELRKILDEVSP+NFEKMNKLL VKDEEI ++KDEIKIMSA WKLKTK L
Sbjct: 192 AFAKAGENKNCELRKILDEVSPKNFEKMNKLLGVKDEEIAKLKDEIKIMSAQWKLKTKGL 251

Query: 255 ESQLEKQRRADQELKKKVLKLEFCLQETRSQTRKLQRMGERRDKAIKELRDQLAAKRKRG 314
           ESQLEKQRRADQELKKKVLKLEFCLQE RSQTRKLQRMGERRDKAIKELRDQLAAK++R 
Sbjct: 252 ESQLEKQRRADQELKKKVLKLEFCLQEARSQTRKLQRMGERRDKAIKELRDQLAAKQQRE 311

Query: 315 VAAEEKQQQNFWDTSGFKIVVSMSMLVLVAFSKR 348
           V   ++Q QNFWDTSGFKIVVSMSML+LV FS+R
Sbjct: 312 VGYGDRQNQNFWDTSGFKIVVSMSMLILVVFSRR 345


>Glyma10g28460.2 
          Length = 306

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/279 (77%), Positives = 236/279 (84%)

Query: 15  VPARDVDPXXXXXXXXXQNFRRNVVSLAAELKELRGRLAAQEKSYAIETLTRQEAETNAK 74
           V AR+VDP         Q+FRRNVVSLA ELKELR RLA+QE+SYA ET TRQEAETNAK
Sbjct: 13  VAAREVDPLLQDLNEKKQSFRRNVVSLAVELKELRSRLASQEQSYAKETQTRQEAETNAK 72

Query: 75  SLELEIGRLQKNLDERNEQLQASASSAEKYLMELDDLKTQLVXXXXXXXXXXXXXXXXQL 134
           ++EL+IGRLQKNL+ERNEQLQASASSAEKYL ELDDL+TQLV                QL
Sbjct: 73  NMELQIGRLQKNLEERNEQLQASASSAEKYLKELDDLRTQLVTTRATADASAASAQSAQL 132

Query: 135 HCVELVKELDEKNSSLREHEDRVTRLAEQLENLQKDLQARESSQKHLKDEVFRIEHDIME 194
            C+ELVKEL+EKN SLREHEDRV RL EQL+NLQKDLQARESSQK LKDEV RIEHDIME
Sbjct: 133 QCLELVKELNEKNGSLREHEDRVLRLGEQLDNLQKDLQARESSQKQLKDEVLRIEHDIME 192

Query: 195 ALTKAGDNKDRELRKILDEVSPRNFEKMNKLLVVKDEEIVRMKDEIKIMSAHWKLKTKEL 254
           AL KAG+NK+ ELRKILDEVSP+NFEKMNK+L VKD+EI ++KDEIKIMSAHWKLKTKEL
Sbjct: 193 ALAKAGENKNCELRKILDEVSPKNFEKMNKILGVKDDEIAKLKDEIKIMSAHWKLKTKEL 252

Query: 255 ESQLEKQRRADQELKKKVLKLEFCLQETRSQTRKLQRMG 293
           ESQLEKQRRADQELKKKVLKLEFCLQE RSQTRKLQR+ 
Sbjct: 253 ESQLEKQRRADQELKKKVLKLEFCLQEARSQTRKLQRVN 291


>Glyma12g29690.1 
          Length = 75

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 59/101 (58%), Gaps = 27/101 (26%)

Query: 104 YLMELDDLKTQLVXXXXXXXXXXXXXXXXQLHCVELVKELDEKNSSLREHEDRVTRLAEQ 163
           YL ELD+L+TQLV                                   +H+DRV RL EQ
Sbjct: 1   YLKELDELRTQLVATRATVNV---------------------------KHKDRVLRLGEQ 33

Query: 164 LENLQKDLQARESSQKHLKDEVFRIEHDIMEALTKAGDNKD 204
           L+NLQKDLQARESSQK LKDEV RIEHDIMEAL K G+N++
Sbjct: 34  LDNLQKDLQARESSQKQLKDEVLRIEHDIMEALAKVGENRN 74


>Glyma09g11400.1 
          Length = 57

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 32/39 (82%)

Query: 133 QLHCVELVKELDEKNSSLREHEDRVTRLAEQLENLQKDL 171
           QL C+ELV EL++KN SLR+HED V RL EQL+NL KDL
Sbjct: 19  QLQCLELVTELNDKNGSLRQHEDCVLRLGEQLDNLHKDL 57