Miyakogusa Predicted Gene
- Lj5g3v1530110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1530110.1 Non Chatacterized Hit- tr|I1LB20|I1LB20_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22371
PE,91.2,0,AAA_21,NULL; no description,NULL; P-loop containing
nucleoside triphosphate hydrolases,NULL; SUBFAMI,CUFF.55425.1
(261 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g28600.1 445 e-125
Glyma10g28600.2 378 e-105
Glyma20g22690.1 317 1e-86
Glyma13g18660.1 265 4e-71
Glyma06g15900.1 58 9e-09
Glyma12g35740.1 53 3e-07
Glyma03g38300.1 52 9e-07
Glyma16g01350.1 51 9e-07
Glyma13g34660.1 50 2e-06
Glyma05g00240.1 50 3e-06
Glyma19g01940.1 49 5e-06
Glyma17g08810.1 49 6e-06
>Glyma10g28600.1
Length = 333
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/251 (86%), Positives = 228/251 (90%)
Query: 11 ATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGK 70
AT+VI+DLRFTYPGIDGHPPPGSTPLIQDF LTL SG RCLLVGSNGAGKTT+LKILGGK
Sbjct: 13 ATIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCLLVGSNGAGKTTLLKILGGK 72
Query: 71 HMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGV 130
H+VEP+MVRVLGRSAFHDT L SSGDLCYLGGEWRRDVAFAGF V IQMDISA+KMIFGV
Sbjct: 73 HLVEPDMVRVLGRSAFHDTTLISSGDLCYLGGEWRRDVAFAGFEVPIQMDISAQKMIFGV 132
Query: 131 GGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXX 190
GI+P+RRAELIKVL IDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT
Sbjct: 133 PGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLA 192
Query: 191 XXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMVYVAHGKLQLAMPMDKVKENSKLS 250
FL+KECDERGATIIYATHIFDGLEDWPT++VYVAHGKLQLAMPMDKVKE SKLS
Sbjct: 193 RADLLRFLRKECDERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDKVKEISKLS 252
Query: 251 LMRTVESWLRK 261
LMRTVESWLRK
Sbjct: 253 LMRTVESWLRK 263
>Glyma10g28600.2
Length = 244
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/217 (84%), Positives = 195/217 (89%)
Query: 11 ATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGK 70
AT+VI+DLRFTYPGIDGHPPPGSTPLIQDF LTL SG RCLLVGSNGAGKTT+LKILGGK
Sbjct: 13 ATIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCLLVGSNGAGKTTLLKILGGK 72
Query: 71 HMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGV 130
H+VEP+MVRVLGRSAFHDT L SSGDLCYLGGEWRRDVAFAGF V IQMDISA+KMIFGV
Sbjct: 73 HLVEPDMVRVLGRSAFHDTTLISSGDLCYLGGEWRRDVAFAGFEVPIQMDISAQKMIFGV 132
Query: 131 GGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXX 190
GI+P+RRAELIKVL IDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT
Sbjct: 133 PGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLA 192
Query: 191 XXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMV 227
FL+KECDERGATIIYATHIFDGLEDWPT++V
Sbjct: 193 RADLLRFLRKECDERGATIIYATHIFDGLEDWPTNIV 229
>Glyma20g22690.1
Length = 261
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/201 (79%), Positives = 168/201 (83%), Gaps = 10/201 (4%)
Query: 61 TTILKILGGKHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMD 120
TTILKILGGKH+VEP+MVRVLGR AFHDT L SSG LCYLGGEWR+DVAFAGF V IQMD
Sbjct: 1 TTILKILGGKHLVEPDMVRVLGRPAFHDTTLISSGHLCYLGGEWRQDVAFAGFEVPIQMD 60
Query: 121 ISAEKMIFGVGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLD 180
ISA+KMIFGV GI+P+RR ELIKVL IDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLD
Sbjct: 61 ISAQKMIFGVPGIDPQRRDELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLD 120
Query: 181 EITXXXXXXXXXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMVYVAHGKLQLAMPM 240
EIT FL+KECDE GATIIYATHIFDGLEDWPT++VYVAHGKLQLAMPM
Sbjct: 121 EITVDLDVLARADLLRFLRKECDEMGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPM 180
Query: 241 DKVKENSKLSLMRTVESWLRK 261
DK RTVESWLRK
Sbjct: 181 DK----------RTVESWLRK 191
>Glyma13g18660.1
Length = 296
Score = 265 bits (677), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 179/269 (66%), Gaps = 17/269 (6%)
Query: 1 MSINGNSVTDAT-------VVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLV 53
+S NG S T A + + ++F+Y D PP L DF L + G RCLLV
Sbjct: 5 LSGNGGSTTMAAENEDSCGIRVTGMQFSY---DVQQPP----LFLDFNLNVSPGSRCLLV 57
Query: 54 GSNGAGKTTILKILGGKHMVE-PEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAG 112
G+NG+GKTT+LKIL GKHMV ++VRVL SAFHDT L SGDL YLGG W ++V AG
Sbjct: 58 GANGSGKTTLLKILAGKHMVGGRDVVRVLSGSAFHDTQLVCSGDLAYLGGSWSKNVGSAG 117
Query: 113 FGVSIQMDISAEKMIFGVGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLK 172
+ +Q D SAE MIFGV G +PERR +LI++L IDL WR+HKVSDGQRRRVQIC+GLL
Sbjct: 118 -EIPLQGDFSAEHMIFGVEGADPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLH 176
Query: 173 PFKVLLLDEITXXXXXXXXXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMVYVAHG 232
P+KVLLLDE+T F K+EC++R A I+YATHIFDGLE W TH+ Y+ G
Sbjct: 177 PYKVLLLDEVTVDLDVVTRMDLLDFFKEECEQREAIIVYATHIFDGLETWATHLAYIQDG 236
Query: 233 KLQLAMPMDKVKE-NSKLSLMRTVESWLR 260
+L+ A + VKE S +L+ VE+WLR
Sbjct: 237 ELRRAEKISNVKELKSSTNLLSVVEAWLR 265
>Glyma06g15900.1
Length = 266
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 36/242 (14%)
Query: 2 SINGNSVTDATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKT 61
+ +GN + + R+L+F++ P+++D + + G +L+G NG GK+
Sbjct: 26 TTSGNRPENFAIEGRNLKFSFTTRQTQ----DVPVLKDCSIRIPCGQFWMLLGPNGCGKS 81
Query: 62 TILKILGGKHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDI 121
T+LKIL G L+ + Y+ G + F + M
Sbjct: 82 TLLKILAGL--------------------LTPTSGTVYVNGP--KSFVFQNPDHQVVMPT 119
Query: 122 SAEKMIFGVGGIN---PERRAELIKVL-GIDLS----WRLHKVSDGQRRRVQICMGLLKP 173
+ FG+G IN E R+ + + L + LS + +S GQ++RV I L +
Sbjct: 120 VDSDVAFGLGKINLAHDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEA 179
Query: 174 FKVLLLDEITXXXXXXXXXXXXSFLKKECDERG-ATIIYATHIFDGLEDWPTHMVYVAHG 232
KVLLLDE+T ++ D T ++ TH + LE + +Y+ G
Sbjct: 180 CKVLLLDELTTFLDEADQVGVIKAVRNSVDTSAEVTALWVTHRLEELE-YADGAIYMEDG 238
Query: 233 KL 234
K+
Sbjct: 239 KV 240
>Glyma12g35740.1
Length = 570
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 28 HPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFH 87
+P G+ +++D G+ + G +GAGKTT+L+IL G+ P +V G+ +
Sbjct: 10 NPGRGAKFILKDVNCEARPGELTAIAGPSGAGKTTLLEILAGRI---PSF-KVSGQVLVN 65
Query: 88 DTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGVGGINPERRAELIKVLGI 147
+ + G + D F V + SA + G + R EL+K LG+
Sbjct: 66 HRPMDVNQFRRTSGYVTQDDALFPSLTVKETLMYSAMLRLPGGRKVAAIRVEELVKELGL 125
Query: 148 D--LSWRL-----HKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXSFLKK 200
D R+ H +S G+RRRV I + L+ V+L+DE T S L+
Sbjct: 126 DHIADSRIGGGSDHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALSVVSLLRL 185
Query: 201 ECDERGATIIYATH--------IFDGL 219
+G TII H +FDGL
Sbjct: 186 VAFNQGKTIILTIHQPGFRILELFDGL 212
>Glyma03g38300.1
Length = 1278
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 13 VVIRDLRFTYPGIDGHPPPGSTPLIQ---DFCLTLHSGDRCLLVGSNGAGKTTILKILGG 69
+ IR + F YP S P IQ D LT+HSG LVG +G+GK+T++ +L
Sbjct: 1033 IQIRHVSFKYP---------SRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALL-- 1081
Query: 70 KHMVEP----------EMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQM 119
+ +P E+ + + GL S + + R ++A+ G +
Sbjct: 1082 QRFYDPDSGQITLDGIEIQNLKLKWLRQQMGLVSQEPVLF-NATIRANIAYGKKGNETEA 1140
Query: 120 D-ISAEKMIFGVGGINPERRAELIKVLGID--LSWRLHKVSDGQRRRVQICMGLLKPFKV 176
+ I+A K+ G I+ ++ G D + R ++S GQ++RV I ++K K+
Sbjct: 1141 EIITAAKLANAHGFISGLQQ-------GYDTVVGERGIQLSGGQKQRVAIARAIIKSPKI 1193
Query: 177 LLLDEIT 183
LLLDE T
Sbjct: 1194 LLLDEAT 1200
>Glyma16g01350.1
Length = 1214
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Query: 6 NSVTDATVVIRDLRFTYPG---IDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTT 62
N T +V R RF +P +++DFCL + +G LVG +G+GK+T
Sbjct: 967 NDRTKGRIVDRSKRFNIEFKMVTFAYPSRPEVTVLRDFCLKVKAGSTVALVGPSGSGKST 1026
Query: 63 ILKILGGKHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEW-RRDVAFAGFGVSIQMDI 121
++ + + +P+ +V + S DL + +W RR +A G S+
Sbjct: 1027 VIWLT--QRFYDPDQGKV----------MMSGIDLREIDVKWLRRQMALVGQEPSLFAGS 1074
Query: 122 SAEKMIFGVGGINPERRAELIK-------VLGIDLSWRLH------KVSDGQRRRVQICM 168
E + FG + E K + G+ + ++S GQ++R+ I
Sbjct: 1075 IRENIAFGDPNASWTEIEEAAKEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIAR 1134
Query: 169 GLLKPFKVLLLDEITXXXXXXXXXXXXSFLKKECDERGATIIYATH 214
+LK +VLLLDE + LKK E AT I H
Sbjct: 1135 AILKKSRVLLLDEASSALDLESEKHIQEALKKVTKE--ATTIIVAH 1178
>Glyma13g34660.1
Length = 571
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 28 HPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFH 87
+P G+ +++D G+ + G +GAGKTT+L+IL G+ P +V G +
Sbjct: 10 NPGRGAKFILKDVNCEARPGEITAIAGPSGAGKTTLLEILAGR---IPPCNKVSGHVLVN 66
Query: 88 DTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGVGGINPERRAELIKVLGI 147
+ + G + D F V + SA + G + R +L+K LG+
Sbjct: 67 HRPMDVNQFRRTSGYVTQDDALFPSLTVRETLMYSAMLRLPGGRKVAAIRVEDLMKELGL 126
Query: 148 D--LSWRL-----HKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXSFLKK 200
D R+ H +S G+RRRV I + L+ V+L+DE T S L+
Sbjct: 127 DHIADSRIGGGSDHSISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALSVVSLLRL 186
Query: 201 ECDERGATIIYATH--------IFDGL 219
+ TII H +FDGL
Sbjct: 187 VAFNQRKTIILTIHQPGFRILELFDGL 213
>Glyma05g00240.1
Length = 633
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 10 DATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKIL-- 67
D V + D+ F YP HP +++ L LH G + LVG +G GK+TI ++
Sbjct: 382 DGEVELDDVWFAYPSRPSHP------VLKGITLKLHPGSKVALVGPSGGGKSTIANLIER 435
Query: 68 -----GGKHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDI- 121
GK ++ + + H S + ++A+ G +DI
Sbjct: 436 FYDPTKGKILLNGVPLVEISHKHLHRKISIVSQEPTLFNCSIEENIAYGFDGKVNDVDIE 495
Query: 122 SAEKMIFGVGGIN--PERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLL 179
+A KM I+ PE+ + G+ ++S GQ++R+ I LL K+LLL
Sbjct: 496 NAAKMANAHEFISKFPEKYQTFVGERGV-------RLSGGQKQRIAIARALLMDPKILLL 548
Query: 180 DEIT 183
DE T
Sbjct: 549 DEAT 552
>Glyma19g01940.1
Length = 1223
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 15 IRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGKHMVE 74
+ D+ F YP P + + Q F + + +G LVG +G+GK+TI+ ++ +
Sbjct: 977 LHDVHFAYPA---RP---NVMIFQGFSIKIDAGRSTALVGQSGSGKSTIIGLIERFYDPM 1030
Query: 75 PEMVRVLGR--SAFHDTGLSS-----SGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMI 127
+V + GR ++H L S + GG R ++A+ + ++D ++I
Sbjct: 1031 KGIVTIDGRDIKSYHLRSLRKHIALVSQEPTLFGGTIRENIAYGASNNNNKVD--ETEII 1088
Query: 128 FGVGGINPERRAELIKVL--GIDLSWRLH--KVSDGQRRRVQICMGLLKPFKVLLLDEIT 183
N + I L G D S R ++S GQ++R+ I +LK +VLLLDE T
Sbjct: 1089 EAARAANAH---DFIASLKDGYDTSCRDRGVQLSGGQKQRIAIARAILKNPEVLLLDEAT 1145
>Glyma17g08810.1
Length = 633
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 10 DATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKIL-- 67
D V + D+ F YP HP +++ L LH G + LVG +G GK+TI ++
Sbjct: 382 DGEVELDDVWFAYPSRPSHP------VLKGITLKLHPGTKVALVGPSGGGKSTIANLIER 435
Query: 68 -----GGKHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDI- 121
GK ++ + + H S + ++A+ G +DI
Sbjct: 436 FYDPTKGKIVLNGVPLVEISHKHLHRKISIVSQEPTLFNCSIEENIAYGFDGKVNDVDIE 495
Query: 122 SAEKMIFGVGGIN--PERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLL 179
+A KM I+ PE+ + G+ ++S GQ++R+ I LL K+LLL
Sbjct: 496 NAAKMANAHEFISKFPEKYQTFVGERGV-------RLSGGQKQRIAIARALLMDPKILLL 548
Query: 180 DEIT 183
DE T
Sbjct: 549 DEAT 552