Miyakogusa Predicted Gene

Lj5g3v1513550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1513550.1 Non Chatacterized Hit- tr|I1NJ43|I1NJ43_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,66.27,2e-16,PHD,Zinc
finger, PHD-finger; zf-RING_2,Zinc finger, RING-type; no
description,Zinc finger,
RING/FYVE,NODE_62393_length_2807_cov_10.026362.path2.1
         (878 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38280.1                                                       769   0.0  
Glyma10g29040.1                                                       609   e-174
Glyma08g02750.1                                                        67   1e-10
Glyma19g01310.1                                                        59   3e-08
Glyma13g23910.1                                                        59   4e-08
Glyma01g42890.1                                                        53   2e-06
Glyma19g05660.1                                                        52   4e-06
Glyma17g08990.1                                                        51   7e-06

>Glyma20g38280.1 
          Length = 794

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/596 (67%), Positives = 434/596 (72%), Gaps = 14/596 (2%)

Query: 293 PKRASLRNNMGLRRKVKCASEDDFIDNDPTITTTCXXXXXXXXXXXXXXXXXXCAPSEAS 352
           P R   R N  LR+K KC  EDDFIDN  TI TT                    A S +S
Sbjct: 203 PLRNKRRKNGRLRKKEKC--EDDFIDNGTTIGTTTRRKQGQKRRRVLLSDSDY-ASSGSS 259

Query: 353 DFEFTISXXXXXXXXXAKKLCGXXXXXXXXXXXXXXXEEAVVHEDXXXXXXXXXXXXXXX 412
           DFEFTIS         AK+LCG               EE  VHE                
Sbjct: 260 DFEFTISEEEREQVREAKRLCGNLRNNLRSSSHLINNEEVGVHEYQHPQRKPPARKGKEK 319

Query: 413 XXXXQVRKGKEKMEDLKSEVVKQVCGICLSEEDRRRVRGVLNCCTHYFCFACIMEWGKVE 472
                 RKGKEK+EDLKS+  KQ CGICLSEED+RRVRGVLNCCTH+FCFACIMEW KVE
Sbjct: 320 IEEPLGRKGKEKVEDLKSKG-KQTCGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVE 378

Query: 473 SRCPVCKQRFKTISKPARSSKGVELREMVIQVPERDQVYQPSEEELRSYIDPYDSVICSE 532
           SRCP+CKQRFK ISKPARS+ G++LRE+VIQVPERDQVYQPSEEELRSYIDPY+ VICSE
Sbjct: 379 SRCPLCKQRFKAISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPYEYVICSE 438

Query: 533 CLQGGDDGLMLLCDVCDSPAHTYCVGLGREVPEGNWYCDGCRPVALGTSSSQAQE--ADP 590
           C QGGDDGLMLLCD+CDSPAHTYCVGLGREVPEGNWYCDGCRPVALG+SSSQ QE  ADP
Sbjct: 439 CHQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQEGVADP 498

Query: 591 IATIQSLHVRPSPV-HVRESIDLNLIXXXXXXXX-------XXXXXXXXVEGVSPVSGGA 642
             ++QS  VRP PV HVRESIDLNLI                        EG SPVSGGA
Sbjct: 499 RVSVQSHPVRPPPVLHVRESIDLNLISSPRAAFNQGFGHLPSSRFSGRSAEGASPVSGGA 558

Query: 643 PTLSERRWIHRXXXXXXSMDRMTSTTGRTNGISAISSTSDLYSSQIDQSRETSSQFARTE 702
           PTLSERRWIHR      S+DRM ST GRTNGISA SSTS+LYSS  DQSR T++  ART+
Sbjct: 559 PTLSERRWIHRQIQQLLSIDRMASTPGRTNGISATSSTSNLYSSHFDQSRGTTTLHARTQ 618

Query: 703 DVGTSYHTFFAERLRNNISPLMQNEALWPRLLGTPPVPNYEQALQFNRSNIVPDGSSFPA 762
           DVGTSYHTFF ERL NN SPLMQN ALW  L+GTPPVP+ EQ  QF+RSNIVPDG   PA
Sbjct: 619 DVGTSYHTFFDERLCNNSSPLMQNGALWSGLMGTPPVPDCEQVHQFSRSNIVPDGGLSPA 678

Query: 763 VKEESNFHLVHEQLESMVTSHLKSLSQNIDLGQSTFMDIAKSCMHTILAACGLEHMKSEV 822
           V+EESNFH   EQL+SMV SHLKSLSQNIDLG +T  DIA+S MHTILAAC LEHMKSEV
Sbjct: 679 VREESNFHFAKEQLQSMVKSHLKSLSQNIDLGHNTIKDIARSSMHTILAACDLEHMKSEV 738

Query: 823 CTVPPPSVCPHIEMMAGGQSSLIKGCCSSCFDSFVGEVVKRILDTRVSSQWLRLGL 878
           CTVPPPS C H+E+MAGGQ+SLIKGCCSSCFDSFVG+VVKRILDTR+SSQWLRLGL
Sbjct: 739 CTVPPPSACSHMELMAGGQTSLIKGCCSSCFDSFVGDVVKRILDTRISSQWLRLGL 794


>Glyma10g29040.1 
          Length = 759

 Score =  609 bits (1571), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 315/498 (63%), Positives = 352/498 (70%), Gaps = 12/498 (2%)

Query: 299 RNNMGLRRKVKCASEDDFIDNDPTITTTCXXXXXXXXXXXXXXXXXXCAPSEASDFEFTI 358
           R N  LR+K KC  ED+F+DN  T   T                    A S +SDFEFTI
Sbjct: 258 RKNGRLRKKEKCEDEDNFMDNG-TTIGTTTGRKRGQKRRRVLLSDSDYASSGSSDFEFTI 316

Query: 359 SXXXXXXXXXAKKLCGXXXXXXXXXXXXXXXEEAVVHEDXXXXXXXXXXXXXXXXXXXQV 418
           S         AK+LCG               +EA VHED                   Q 
Sbjct: 317 SEEEREQVREAKRLCGNLRNNLRSSSHPIN-KEAGVHEDQHRQRKPPARKGKEKIEEPQG 375

Query: 419 RKGKEKMEDLKSEVVKQVCGICLSEEDRRRVRGVLNCCTHYFCFACIMEWGKVESRCPVC 478
           RKGKEK+EDLKSE  KQ CGICLSEED+RRVRGVLNCCTH+FCFACIMEW KVESRCP+C
Sbjct: 376 RKGKEKVEDLKSEKGKQTCGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVESRCPLC 435

Query: 479 KQRFKTISKPARSSKGVELREMVIQVPERDQVYQPSEEELRSYIDPYDSVICSECLQGGD 538
           KQRFKTISKPARS+ G++LRE+VIQVPERDQVYQPSEEELRSYIDPY+ V+CSEC QGGD
Sbjct: 436 KQRFKTISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPYEYVMCSECHQGGD 495

Query: 539 DGLMLLCDVCDSPAHTYCVGLGREVPEGNWYCDGCRPVALGTSSSQAQE--ADPIATIQS 596
           DGLMLLCD+CDSPAHTYCVGLGREVPEGNWYCDGCRPVALG+SSSQ QE  ADP  ++QS
Sbjct: 496 DGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQEGVADPRVSVQS 555

Query: 597 LHVRPSP-VHVRESIDLNLIXXXXXXXX-------XXXXXXXXVEGVSPVSGGAPTLSER 648
             +RP P +HVRESIDLNLI                       VEG SPVSGGAPTLSER
Sbjct: 556 HPIRPPPALHVRESIDLNLISSPRAAFNQGFGHLPSSRFSGRSVEGASPVSGGAPTLSER 615

Query: 649 RWIHRXXXXXXSMDRMTSTTGRTNGISAISSTSDLYSSQIDQSRETSSQFARTEDVGTSY 708
           RWIHR      S+DRM S+ GRTNG+SA SSTS+LYSSQIDQSR T++  ART+DVGTSY
Sbjct: 616 RWIHRQIQQLLSIDRMASSPGRTNGVSATSSTSNLYSSQIDQSRGTATLHARTQDVGTSY 675

Query: 709 HTFFAERLRNNISPLMQNEALWPRLLGTPPVPNYEQALQFNRSNIVPDGSSFPAVKEESN 768
           HTFF ERL NN SPLMQN ALWP L+GT PVP+ E A QF+RSNIVPD    PA++EESN
Sbjct: 676 HTFFDERLCNNSSPLMQNGALWPGLMGTTPVPDCELAHQFSRSNIVPDSGLSPAIREESN 735

Query: 769 FHLVHEQLESMVTSHLKS 786
           FH+  EQL+SMV SHLK+
Sbjct: 736 FHIAKEQLQSMVKSHLKN 753



 Score = 73.9 bits (180), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 2/68 (2%)

Query: 38  RNSSDEDYCSSLDGCASEDSFDGFIVDXXXXXFRRVRNSSRSKAKIGICSWRKNASRSSR 97
           R +SD  YCSSLDGCASE+ FD F+ +     FRRVR+ +RSK+K GI   RKN S+SS 
Sbjct: 38  REASDY-YCSSLDGCASEEGFDSFM-EEEEEQFRRVRSINRSKSKKGIAGRRKNGSKSSH 95

Query: 98  KRGRIAYA 105
           +RGRI YA
Sbjct: 96  RRGRITYA 103


>Glyma08g02750.1 
          Length = 177

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 19/150 (12%)

Query: 437 CGICLSEEDRRRVRGVLNCCTHYFCFACIMEWGKVESRCPVCKQRFKTIS-KPARSSKGV 495
           CGIC+   D    RG+L+CC H+FCF CI  W  + + CP+C+  F+ I+  P   + G 
Sbjct: 10  CGICM---DMVIDRGLLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGN 66

Query: 496 ELREMVIQVPERDQVYQPSEEELR--SYIDPYDSVICSE-----------CLQGGDD-GL 541
              E      + D   +     L   SY    ++VIC +            ++G  D   
Sbjct: 67  NKVEDDSFFRDDDWSIEEKNNTLSFPSYYIDENAVICLDGDGCKVRNGLATIEGDSDLDT 126

Query: 542 MLLCDVCDSPAHTYCVGLGRE-VPEGNWYC 570
            + CD CD   H +CVG   E   +  W C
Sbjct: 127 SIACDSCDIWYHAFCVGFDTEGTSDSTWLC 156


>Glyma19g01310.1 
          Length = 2092

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 524  PYDSVICSECLQGGDDGLMLLCDVCDSPAHTYCVG--LGREVPEGNWYCDGC 573
            P+D  +C  C    DD  +LLCD CD+  HTYC+   L R +PEGNWYC  C
Sbjct: 1223 PWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLAR-IPEGNWYCPSC 1273


>Glyma13g23910.1 
          Length = 2142

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 524  PYDSVICSECLQGGDDGLMLLCDVCDSPAHTYCVG--LGREVPEGNWYCDGC 573
            P+D  +C  C    DD  +LLCD CD+  HTYC+   L R +PEGNWYC  C
Sbjct: 1286 PWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLAR-IPEGNWYCPSC 1336


>Glyma01g42890.1 
          Length = 1362

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 529 ICSECLQGGDDGLMLLCDVCDSPAHTYCVGLGRE-VPEGNWYCDGC 573
           IC +C  G    LMLLCD CD   HTYC+    E +P GNWYC  C
Sbjct: 184 ICEQCKSGLHGELMLLCDRCDKGWHTYCLSPPLEHIPPGNWYCFNC 229


>Glyma19g05660.1 
          Length = 468

 Score = 51.6 bits (122), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 21/160 (13%)

Query: 437 CGICLSEEDRRRVRGVLNCCTHYFCFACIMEWG------KVESRCPVCKQRFKTISKPAR 490
           C ICL+E      RG+L C  H FCF CI  W       +  S CP+CK  F  I K   
Sbjct: 316 CVICLTE--FSSTRGILPC-GHRFCFPCIQNWADHTTSMRKTSTCPLCKASFMMIKKVEH 372

Query: 491 SSKGVELREMVIQVPERDQ----VYQPSEEELRSYI-DPYDSVICSECLQGGDDGLMLLC 545
           ++   +  ++  Q    D     ++ P ++ L   I +   S  C  C     + L+  C
Sbjct: 373 AATADQ--KIYSQTIPCDNSASVIFIPVDQNLPDNIFESAQSNACVVCRGREPEDLLESC 430

Query: 546 DVCD-SPAHTYCVGLGREVPEGNWYCDGCRPVALGTSSSQ 584
           DVC     H+YC+    + P   W C  C+ + +   S+ 
Sbjct: 431 DVCHIRKIHSYCM----DPPLRPWICTHCKELRMHYRSNH 466


>Glyma17g08990.1 
          Length = 204

 Score = 50.8 bits (120), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query: 523 DPYDSVICSECLQGGDDGLMLLCDVCDSPAHTYCVGLGREVPEGNWYCDGC 573
           D Y    C  C  G D+ L+LLCD+CD+ +HTYCVGLG  VPEG+W+C  C
Sbjct: 7   DSYTETKCGVCHAGTDEHLLLLCDLCDTASHTYCVGLGYTVPEGDWFCHDC 57