Miyakogusa Predicted Gene

Lj5g3v1498020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1498020.1 Non Chatacterized Hit- tr|C0PAR4|C0PAR4_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,45.26,1e-17,ZF_RING_2,Zinc finger, RING-type; RING/U-box,NULL;
Ring finger,Zinc finger, RING-type; no descriptio,CUFF.55344.1
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38050.1                                                       516   e-147
Glyma10g29230.1                                                       515   e-146
Glyma20g38050.2                                                       511   e-145
Glyma19g42100.1                                                       482   e-136
Glyma03g39490.1                                                       479   e-135

>Glyma20g38050.1 
          Length = 439

 Score =  516 bits (1330), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 247/283 (87%), Positives = 258/283 (91%), Gaps = 1/283 (0%)

Query: 27  SVSCSICLEVVADNGDRSWAKLHCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 86
           SVSCSICLEVVADNGDRSW+KL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN
Sbjct: 39  SVSCSICLEVVADNGDRSWSKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 98

Query: 87  GGRSYPEFNMDDWTYDEDLYDLSYSELQSFGVHWCPFGNLARLPSPFEEGEFSQTAYHDM 146
           G RSYPEF+MD+WT+DEDLYDLSYSE+ SFGVHWCPFGNLARLPS FEEGEFS +AYHD+
Sbjct: 99  GCRSYPEFSMDEWTHDEDLYDLSYSEM-SFGVHWCPFGNLARLPSSFEEGEFSSSAYHDV 157

Query: 147 LGQHAIFAEHTAVSSGSHHCPYIAYVGPIHPSSSNSGGTVSEASNFNHWNGSSVPNDMPA 206
           LGQHAIFAEHTAVSS SH CPYIAY GPIHPSSSNSGGTVSEASNFNHWNGSSVP+DMP 
Sbjct: 158 LGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSSSNSGGTVSEASNFNHWNGSSVPSDMPT 217

Query: 207 SFTFPAVDLHYHGWEHHSPPFSTASSRLVAADQPSVSPGNQRPVRGGSDVPRSGSFMHPF 266
           S+TFPAVDLHYH WEHHSPPFSTASSRLVAADQPSVSPG+QRP RGGSDVPRSGSFMHPF
Sbjct: 218 SYTFPAVDLHYHSWEHHSPPFSTASSRLVAADQPSVSPGSQRPARGGSDVPRSGSFMHPF 277

Query: 267 LVGHXXXXXXXXXXXXXLIPPYPGSNARARDRVQALQAYYQPQ 309
           LVGH             +IPPYPGSNAR RDRVQALQAYYQPQ
Sbjct: 278 LVGHSSAARVGSSVASSMIPPYPGSNARTRDRVQALQAYYQPQ 320


>Glyma10g29230.1 
          Length = 431

 Score =  515 bits (1327), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/283 (87%), Positives = 258/283 (91%), Gaps = 1/283 (0%)

Query: 27  SVSCSICLEVVADNGDRSWAKLHCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 86
           SVSCSICLEVVADNGDRSW+KL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN
Sbjct: 31  SVSCSICLEVVADNGDRSWSKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 90

Query: 87  GGRSYPEFNMDDWTYDEDLYDLSYSELQSFGVHWCPFGNLARLPSPFEEGEFSQTAYHDM 146
           G RSYPEF+MD+WT+DEDLYDLSYSE+ SFGVHWCPFGNLARLPS FEEGEFS +AYHD+
Sbjct: 91  GCRSYPEFSMDEWTHDEDLYDLSYSEM-SFGVHWCPFGNLARLPSSFEEGEFSSSAYHDV 149

Query: 147 LGQHAIFAEHTAVSSGSHHCPYIAYVGPIHPSSSNSGGTVSEASNFNHWNGSSVPNDMPA 206
           LGQHAIFAEHTAVSS SH CPYIAY GPIHPSSSNSGGTVSEASNFNHWNGSSVP+DMP 
Sbjct: 150 LGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSSSNSGGTVSEASNFNHWNGSSVPSDMPT 209

Query: 207 SFTFPAVDLHYHGWEHHSPPFSTASSRLVAADQPSVSPGNQRPVRGGSDVPRSGSFMHPF 266
           S+TFPAVDLHY  WEHHSPPFSTASSRLVAADQPSVSPG+QRP RGGSDVPRSGSFMHPF
Sbjct: 210 SYTFPAVDLHYRSWEHHSPPFSTASSRLVAADQPSVSPGSQRPARGGSDVPRSGSFMHPF 269

Query: 267 LVGHXXXXXXXXXXXXXLIPPYPGSNARARDRVQALQAYYQPQ 309
           LVGH             +IPPYPGSNARARDRVQALQAYYQPQ
Sbjct: 270 LVGHSSAARAGSSVASSMIPPYPGSNARARDRVQALQAYYQPQ 312


>Glyma20g38050.2 
          Length = 435

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 247/283 (87%), Positives = 258/283 (91%), Gaps = 5/283 (1%)

Query: 27  SVSCSICLEVVADNGDRSWAKLHCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 86
           SVSCSICLEVVADNGDRSW+KL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN
Sbjct: 39  SVSCSICLEVVADNGDRSWSKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 98

Query: 87  GGRSYPEFNMDDWTYDEDLYDLSYSELQSFGVHWCPFGNLARLPSPFEEGEFSQTAYHDM 146
           G RSYPEF+MD+WT+DEDLYDLSYSE+ SFGVHWCPFGNLARLPS FEEGEFS +AYHD+
Sbjct: 99  GCRSYPEFSMDEWTHDEDLYDLSYSEM-SFGVHWCPFGNLARLPSSFEEGEFSSSAYHDV 157

Query: 147 LGQHAIFAEHTAVSSGSHHCPYIAYVGPIHPSSSNSGGTVSEASNFNHWNGSSVPNDMPA 206
           LGQHAIFAEHTAVSS SH CPYIAY GPIHPSSSNSGGTVSEASNFNHWNGSSVP+DMP 
Sbjct: 158 LGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSSSNSGGTVSEASNFNHWNGSSVPSDMPT 217

Query: 207 SFTFPAVDLHYHGWEHHSPPFSTASSRLVAADQPSVSPGNQRPVRGGSDVPRSGSFMHPF 266
           S+TFPAVDLHYH WEHHSPPFSTASSRLVAADQPSVSPG+QRP RGGSDVPRSGSFMHPF
Sbjct: 218 SYTFPAVDLHYHSWEHHSPPFSTASSRLVAADQPSVSPGSQRPARGGSDVPRSGSFMHPF 277

Query: 267 LVGHXXXXXXXXXXXXXLIPPYPGSNARARDRVQALQAYYQPQ 309
           LVGH             +IPPYPGSNAR RDRVQALQAYYQPQ
Sbjct: 278 LVGH----RVGSSVASSMIPPYPGSNARTRDRVQALQAYYQPQ 316


>Glyma19g42100.1 
          Length = 417

 Score =  482 bits (1241), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/283 (81%), Positives = 246/283 (86%), Gaps = 1/283 (0%)

Query: 27  SVSCSICLEVVADNGDRSWAKLHCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 86
           SV CSICLE V DNGDRSWAKL CGHQFHLDCIGSAFNIKGAMQCPNCRK+EKGQWLYAN
Sbjct: 18  SVCCSICLEAVTDNGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKVEKGQWLYAN 77

Query: 87  GGRSYPEFNMDDWTYDEDLYDLSYSELQSFGVHWCPFGNLARLPSPFEEGEFSQTAYHDM 146
           G RSYPEF+MD+WT+DEDLYDLSYSE+ SFGVHWCPFGNL RLPS FEEG+FS TAYHD+
Sbjct: 78  GCRSYPEFSMDEWTHDEDLYDLSYSEM-SFGVHWCPFGNLTRLPSSFEEGDFSSTAYHDV 136

Query: 147 LGQHAIFAEHTAVSSGSHHCPYIAYVGPIHPSSSNSGGTVSEASNFNHWNGSSVPNDMPA 206
           LGQHAIFAEHTAVSS SH CPYIAY GPIHPS+SNSGGTVSEASNFNHWNG  VP DMP 
Sbjct: 137 LGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSTSNSGGTVSEASNFNHWNGPPVPGDMPT 196

Query: 207 SFTFPAVDLHYHGWEHHSPPFSTASSRLVAADQPSVSPGNQRPVRGGSDVPRSGSFMHPF 266
           S+TFPAVDLHYH WEH+S  FS+A+SRL  A+Q SVSPG+QRP R GS+VPRSGSFMHPF
Sbjct: 197 SYTFPAVDLHYHSWEHNSSHFSSANSRLGTAEQASVSPGSQRPARVGSEVPRSGSFMHPF 256

Query: 267 LVGHXXXXXXXXXXXXXLIPPYPGSNARARDRVQALQAYYQPQ 309
           LVGH             +IPPYPGSNARARDRVQALQAYYQPQ
Sbjct: 257 LVGHSSAARAGNSVASSMIPPYPGSNARARDRVQALQAYYQPQ 299


>Glyma03g39490.1 
          Length = 417

 Score =  479 bits (1234), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/283 (80%), Positives = 244/283 (86%), Gaps = 1/283 (0%)

Query: 27  SVSCSICLEVVADNGDRSWAKLHCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 86
           SV CSICLE V DNGDRSWAKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN
Sbjct: 18  SVPCSICLEAVTDNGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYAN 77

Query: 87  GGRSYPEFNMDDWTYDEDLYDLSYSELQSFGVHWCPFGNLARLPSPFEEGEFSQTAYHDM 146
           G RSYPEF+MD+WT+DEDLYD+SYSE+ SFGVHWCPFGNL RLPS FEEG+FS  AYHDM
Sbjct: 78  GCRSYPEFSMDEWTHDEDLYDVSYSEM-SFGVHWCPFGNLTRLPSSFEEGDFSSIAYHDM 136

Query: 147 LGQHAIFAEHTAVSSGSHHCPYIAYVGPIHPSSSNSGGTVSEASNFNHWNGSSVPNDMPA 206
           LGQ AIFAEHTAVSS SH CPYIAY GPIHPS+SNSG TVSEASNFNHWNG  VP DMP 
Sbjct: 137 LGQQAIFAEHTAVSSASHPCPYIAYFGPIHPSTSNSGLTVSEASNFNHWNGPPVPGDMPT 196

Query: 207 SFTFPAVDLHYHGWEHHSPPFSTASSRLVAADQPSVSPGNQRPVRGGSDVPRSGSFMHPF 266
           S+TFPAVDLHYH WEH+S  FS+A+SRL  ++Q SVSPG+QRP RGGSDVPRSGSFMHPF
Sbjct: 197 SYTFPAVDLHYHSWEHNSSHFSSANSRLGTSEQTSVSPGSQRPARGGSDVPRSGSFMHPF 256

Query: 267 LVGHXXXXXXXXXXXXXLIPPYPGSNARARDRVQALQAYYQPQ 309
           LVGH             +IPPYPGSNARARDRVQALQAYYQPQ
Sbjct: 257 LVGHSSAARAGNSVASSMIPPYPGSNARARDRVQALQAYYQPQ 299