Miyakogusa Predicted Gene

Lj5g3v1496740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1496740.1 tr|G7I8P0|G7I8P0_MEDTR ATP-dependent DNA helicase
Q4 OS=Medicago truncatula GN=MTR_1g083250 PE=4 SV=,65.95,0,DNA
HELICASE,NULL; DNA HELICASE RECQ FAMILY MEMBER,NULL;
UBA,Ubiquitin-associated/translation elonga,CUFF.55315.1
         (371 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37970.1                                                       407   e-113
Glyma20g37970.2                                                       406   e-113
Glyma09g34860.1                                                       160   3e-39
Glyma09g08180.1                                                       150   3e-36
Glyma10g28960.1                                                       149   6e-36
Glyma08g20070.1                                                       141   1e-33
Glyma18g05570.1                                                       136   4e-32
Glyma11g31710.1                                                       129   5e-30
Glyma08g10780.1                                                       100   4e-21

>Glyma20g37970.1 
          Length = 854

 Score =  407 bits (1046), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/372 (58%), Positives = 254/372 (68%), Gaps = 39/372 (10%)

Query: 1   MDANNNTSSDQVIAEMVEMGFKHSTILEAIEAVGPSIRSAVEHIFKXXXXXXXXXXXXXX 60
           MD N  TSS QVIAEM+ MGF ++ I+EAI+  GPSI SAVEHI                
Sbjct: 1   MDGNK-TSSAQVIAEMIGMGFDYTDIMEAIKVAGPSIPSAVEHILNSTARTPKLHA---- 55

Query: 61  XXXFKSRNGNALNKQXXXXXXXXXXXXI-DHYFKPIGKVKSKKS--ENEGVVNDDAMRAE 117
                 R    L KQ            I DH+     K +S +   +   +V  +   A+
Sbjct: 56  ---HNGRKKTVLRKQPFRSCRQVRQSKIFDHFHSNDAKEESPQMGVDPNPIVLSEPFEAQ 112

Query: 118 ELDVTSDWEHNKVKKSEXXXXXXXXXXXXXXXXXXWEHTVSKLLQKHFGFSALKSFQKEA 177
           +LD+  DWE                              VS L+QKHFGFS+LK+FQKEA
Sbjct: 113 DLDIAYDWEQR----------------------------VSLLMQKHFGFSSLKTFQKEA 144

Query: 178 LAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVVVVISPLISLMQDQCWKLTKHGLSAC 237
           L+AW+A++DCLVLAATGSGKSLCFQ+PALL+GKVVVVISPLISLM DQC KLT+HG+SAC
Sbjct: 145 LSAWLAHKDCLVLAATGSGKSLCFQIPALLSGKVVVVISPLISLMHDQCLKLTRHGISAC 204

Query: 238 FLGSGQRDDTVERKAMKGMYSIIYVCPETLLRLLPQLEKLAKGRGIALFAIDEVHCVSKW 297
           FLGSGQ DDTVE+KAM G+YSI+Y+CPET+LRL+  L+KLA+  GIALFAIDEVHCVSKW
Sbjct: 205 FLGSGQPDDTVEQKAMGGLYSIVYICPETVLRLIEPLQKLAESHGIALFAIDEVHCVSKW 264

Query: 298 GHDFRPAYRELSVLRESFCTSTIKSLKFDIPLMALTATSTKRVREDILESLCMSKGTKVV 357
           GHDFRP YR LSVLRE+F  S +KSLKFDIPLMALTAT+TKRVREDIL+SL MSK T VV
Sbjct: 265 GHDFRPDYRRLSVLRENFSASKLKSLKFDIPLMALTATATKRVREDILKSLHMSKETNVV 324

Query: 358 LTSFFRPNLRFM 369
           LTSFFR NLRFM
Sbjct: 325 LTSFFRSNLRFM 336


>Glyma20g37970.2 
          Length = 784

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/372 (58%), Positives = 254/372 (68%), Gaps = 39/372 (10%)

Query: 1   MDANNNTSSDQVIAEMVEMGFKHSTILEAIEAVGPSIRSAVEHIFKXXXXXXXXXXXXXX 60
           MD N  TSS QVIAEM+ MGF ++ I+EAI+  GPSI SAVEHI                
Sbjct: 1   MDGNK-TSSAQVIAEMIGMGFDYTDIMEAIKVAGPSIPSAVEHILNSTARTPKLHA---- 55

Query: 61  XXXFKSRNGNALNKQXXXXXXXXXXXXI-DHYFKPIGKVKSKKS--ENEGVVNDDAMRAE 117
                 R    L KQ            I DH+     K +S +   +   +V  +   A+
Sbjct: 56  ---HNGRKKTVLRKQPFRSCRQVRQSKIFDHFHSNDAKEESPQMGVDPNPIVLSEPFEAQ 112

Query: 118 ELDVTSDWEHNKVKKSEXXXXXXXXXXXXXXXXXXWEHTVSKLLQKHFGFSALKSFQKEA 177
           +LD+  DWE                              VS L+QKHFGFS+LK+FQKEA
Sbjct: 113 DLDIAYDWEQR----------------------------VSLLMQKHFGFSSLKTFQKEA 144

Query: 178 LAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVVVVISPLISLMQDQCWKLTKHGLSAC 237
           L+AW+A++DCLVLAATGSGKSLCFQ+PALL+GKVVVVISPLISLM DQC KLT+HG+SAC
Sbjct: 145 LSAWLAHKDCLVLAATGSGKSLCFQIPALLSGKVVVVISPLISLMHDQCLKLTRHGISAC 204

Query: 238 FLGSGQRDDTVERKAMKGMYSIIYVCPETLLRLLPQLEKLAKGRGIALFAIDEVHCVSKW 297
           FLGSGQ DDTVE+KAM G+YSI+Y+CPET+LRL+  L+KLA+  GIALFAIDEVHCVSKW
Sbjct: 205 FLGSGQPDDTVEQKAMGGLYSIVYICPETVLRLIEPLQKLAESHGIALFAIDEVHCVSKW 264

Query: 298 GHDFRPAYRELSVLRESFCTSTIKSLKFDIPLMALTATSTKRVREDILESLCMSKGTKVV 357
           GHDFRP YR LSVLRE+F  S +KSLKFDIPLMALTAT+TKRVREDIL+SL MSK T VV
Sbjct: 265 GHDFRPDYRRLSVLRENFSASKLKSLKFDIPLMALTATATKRVREDILKSLHMSKETNVV 324

Query: 358 LTSFFRPNLRFM 369
           LTSFFR NLRFM
Sbjct: 325 LTSFFRSNLRFM 336


>Glyma09g34860.1 
          Length = 690

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 134/226 (59%), Gaps = 21/226 (9%)

Query: 153 WEHTVSKLLQKHFGFSALKSFQKEALAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVV 212
           W+     +    FG S+ ++ Q+E + A ++  D LV+ A G GKSLC+Q+PA+L   + 
Sbjct: 72  WDSEADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLRDGIA 131

Query: 213 VVISPLISLMQDQCWKLTKHGLSACFLGSGQRDD------TVERKAMKGMYSIIYVCPET 266
           +V+SPL+SL+QDQ   LT  G+ A  L S  + D      T+E+   +G   I+YV PE 
Sbjct: 132 LVVSPLLSLIQDQVMGLTALGIPAYMLTSTNKGDEKFIYKTLEKG--EGELKILYVTPEK 189

Query: 267 L---LRLLPQLEKLAKGRGIALFAIDEVHCVSKWGHDFRPAYRELSVLRESFCTSTIKSL 323
           +    R + +LEK      ++L +IDE HC S+WGHDFRP Y+ LS+L+  F        
Sbjct: 190 ISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLSILKTQFPR------ 243

Query: 324 KFDIPLMALTATSTKRVREDILESLCMSKGTKVVLTSFFRPNLRFM 369
              +P++ALTAT+T+RV+ D++E L + +  K V ++  RPNL +M
Sbjct: 244 ---VPIVALTATATQRVQNDLIEMLHIPRCVKFV-STVNRPNLFYM 285


>Glyma09g08180.1 
          Length = 756

 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 134/238 (56%), Gaps = 33/238 (13%)

Query: 154 EHTVSKLLQKHFGFSALKSFQKEALAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVVV 213
           + T+ KLL+ HFG+   +  Q +A+ A ++ +DC  L  TG GKS+C+Q+PAL    +V+
Sbjct: 23  KETLVKLLRWHFGYPDFRDMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGIVL 82

Query: 214 VISPLISLM----------------QDQCWKLTKHGLSACFLGSGQRDDTV-----ERKA 252
           V+ PLI+LM                ++Q   L + G++A FL S +  D       +  +
Sbjct: 83  VVCPLIALMVCESFKLHRIYGFFRHENQVMALKEKGIAAEFLSSTKTTDAKVKIHEDLDS 142

Query: 253 MKGMYSIIYVCPE--TLLRLLPQLEKLAKGRGIALFAIDEVHCVSKWGHDFRPAYRELSV 310
            K    ++YV PE  T    + +L K+     + L AIDE HC+S WGHDFRP+YR+LS 
Sbjct: 143 GKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSS 202

Query: 311 LRESFCTSTIKSLKFDIPLMALTATSTKRVREDILESLCMSKGTKVVLTSFFRPNLRF 368
           LR             D+P++ALTAT+  +V++D++ESL M +   ++ +SF RPN+ +
Sbjct: 203 LRSHLP---------DVPILALTATAVPKVQKDVVESLQM-QNPLMLKSSFNRPNIYY 250


>Glyma10g28960.1 
          Length = 521

 Score =  149 bits (375), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 121/213 (56%), Gaps = 19/213 (8%)

Query: 165 FGFSALKSFQKEALAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVVVVISPLISLMQD 224
           FG    +  Q +A  A +A +D  +L  TG GKSLC+Q+PA L   V VV+SPL+SL+QD
Sbjct: 204 FGNRTFRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQD 263

Query: 225 QCWKLT-KHGLSACFLGSGQRDDTV-----ERKAMKGMYSIIYVCPETLL---RLLPQLE 275
           Q   L  K G+ + FL S Q    V     E +  K    ++YV PE +      L  L+
Sbjct: 264 QIITLNLKFGIPSTFLNSQQTASQVTAVLQELRKDKPSCKLLYVTPERIAGNQSFLEILK 323

Query: 276 KLAKGRGIALFAIDEVHCVSKWGHDFRPAYRELSVLRESFCTSTIKSLKFDIPLMALTAT 335
            + +   +A F +DE HCVS+WGHDFRP YR L  L+  F          D+P+MALTAT
Sbjct: 324 FMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKLHFP---------DVPVMALTAT 374

Query: 336 STKRVREDILESLCMSKGTKVVLTSFFRPNLRF 368
           +T  VREDIL++L +     V+  SF RPNL++
Sbjct: 375 ATHAVREDILKALRIPHAL-VLERSFDRPNLKY 406


>Glyma08g20070.1 
          Length = 1117

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 18/215 (8%)

Query: 162 QKHFGFSALKSFQKEALAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVVVVISPLISL 221
           +K FG  + +  Q+E + A ++  D  VL  TG GKSL +Q+PAL+   + +VISPL+SL
Sbjct: 374 KKVFGNHSFRPNQREIINASMSGCDVFVLMPTGGGKSLTYQLPALIRPGITLVISPLVSL 433

Query: 222 MQDQCWKLTKHGLSACFLGSG-----QRDDTVERKAMKGMYSIIYVCPETLLR---LLPQ 273
           +QDQ   L +  + A +L +      Q++   E  +    Y ++YV PE + R   LL  
Sbjct: 434 IQDQIMHLLQANIPAAYLSANMEWAEQQEILRELNSDYCKYKLLYVTPEKVARSDNLLRH 493

Query: 274 LEKLAKGRGIALFAIDEVHCVSKWGHDFRPAYRELSVLRESFCTSTIKSLKFDIPLMALT 333
           L+ L     +A   IDE HCVS+WGHDFRP Y+ L +L++ F  +         P++ALT
Sbjct: 494 LDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT---------PVLALT 544

Query: 334 ATSTKRVREDILESLCMSKGTKVVLTSFFRPNLRF 368
           AT+T  V+ED++++L +     +   SF RPNL +
Sbjct: 545 ATATASVKEDVVQALGLVNCI-IFRQSFNRPNLWY 578


>Glyma18g05570.1 
          Length = 375

 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 10/168 (5%)

Query: 201 FQVPALLTGKVVVVISPLISLMQDQCWKLTKHGLSACFLGSGQRDDTVERKAMKGMYSII 260
           +QVP L+  K  +V+SPLISLMQDQ   L + G+ A +LGS Q+D TV  KA  G + I+
Sbjct: 74  YQVPPLVAKKTGIVVSPLISLMQDQVMALKQRGIKAEYLGSAQKDFTVHSKAEHGQFDIL 133

Query: 261 YVCPETLLRLLPQLEKLAKGRGIALFAIDEVHCVSKWGHDFRPAYRELSVLRESFCTSTI 320
           ++ PE    +           GI+LFA+DE HC+S+WGHDFR  Y+ L  LRE       
Sbjct: 134 FMTPEKACTVPSSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLRE------- 186

Query: 321 KSLKFDIPLMALTATSTKRVREDILESLCMSKGTKVVLTSFFRPNLRF 368
             +  D+P + LTAT+T++VR DI+ SL ++    V + SF R NL +
Sbjct: 187 --VLLDVPFVGLTATATEKVRYDIISSLKLNN-PYVTIGSFDRTNLFY 231


>Glyma11g31710.1 
          Length = 382

 Score =  129 bits (324), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 113/212 (53%), Gaps = 40/212 (18%)

Query: 161 LQKHFGFSALKSFQKEALAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVVVVISPLIS 220
            QK+F FS  + +Q+E                          VP L+  K  +V+SPLIS
Sbjct: 63  FQKYFRFSDFRPYQRE--------------------------VPPLVVKKTGIVVSPLIS 96

Query: 221 LMQDQCWKLTKHGLSACFLGSGQRDDTVERKAMKGMYSIIYVCPETLLRLLPQLEKLAKG 280
           LM+DQ   L + G+ A +LGS Q+D TV  KA  G + I+++ PE    +  +L  LA  
Sbjct: 97  LMRDQVMALKQRGIKAEYLGSAQKDFTVHSKAEHGQFDILFMTPEKACTVPSRLPVLAHT 156

Query: 281 R----GIALFAIDEVHCVSKWGHDFRPAYRELSVLRESFCTSTIKSLKFDIPLMALTATS 336
                GI+LFA+DE HC+S+WGHDFR  Y+ L  LRE         +  D+P + LTAT+
Sbjct: 157 MSCLAGISLFAVDEAHCISEWGHDFRVEYKHLDKLRE---------VLLDVPFVGLTATA 207

Query: 337 TKRVREDILESLCMSKGTKVVLTSFFRPNLRF 368
           T++V+ DI+ SL ++    V + S  R NL +
Sbjct: 208 TEKVQYDIIGSLKLNY-PFVTIGSVDRTNLFY 238


>Glyma08g10780.1 
          Length = 865

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 154 EHTVSKLLQKHFGFSALKSFQKEALAAWVANEDCLVLAATGSGKSLCFQVPALLTGKVVV 213
           E  + KLL+   G+   +  Q EA+   +A +  +V+  TG+GKSLC+Q+PA++   V +
Sbjct: 196 EENLVKLLRLVHGYDCFRDGQVEAIKMVLAGKSSVVVLPTGAGKSLCYQLPAVILPGVTL 255

Query: 214 VISPLISLMQDQCWKLTKHGLSACFLGSGQRDDTVE---RKAMKGMYSIIYVCPETLLR- 269
           V+SPL++LM DQ  +L  H +    L S Q  +      ++  +G   +++V PE  L  
Sbjct: 256 VVSPLVALMIDQLRQLP-HVIMGGLLSSTQTPEEASESLKQLRQGGIKVLFVSPERFLNE 314

Query: 270 -LLPQLEKLAKGRGIALFAIDEVHCVSKWGHDFRPAYREL 308
             L  +  L     I+L  IDE HC+S+W H+FRP++  L
Sbjct: 315 EFLSTISSLP---AISLVVIDEAHCISEWSHNFRPSFMRL 351