Miyakogusa Predicted Gene

Lj5g3v1495690.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1495690.2 tr|B3H5I5|B3H5I5_ARATH Ubiquitin family protein
OS=Arabidopsis thaliana GN=At5g57860 PE=4
SV=1,65.15,1e-17,Ubiquitin-like,NULL; AT7SL-1 (ARABIDOPSIS 7SL RNA
1),NULL; UBIQUITIN,NULL; ubiquitin,Ubiquitin; UBIQ,CUFF.55311.2
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g24070.3                                                       183   3e-47
Glyma04g24070.2                                                       183   3e-47
Glyma04g24070.1                                                       183   3e-47
Glyma06g30620.3                                                       177   3e-45
Glyma06g30620.1                                                       176   5e-45
Glyma06g30620.4                                                       166   5e-42
Glyma06g30620.2                                                       132   6e-32
Glyma13g44910.1                                                        47   4e-06

>Glyma04g24070.3 
          Length = 103

 Score =  183 bits (465), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 95/103 (92%)

Query: 1   MDMYIRVKRKMTTYFIRCKPSDKILDVKQKLEELVDQPANNQQLILHGTGEVLEDAKTLA 60
           MDMYIRVKR  TTYFIRCKPSDKILD+KQKL+ELVDQPANNQ+LIL  TGEVLED+KTLA
Sbjct: 1   MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPVTGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALALRKDDNEFEEVNIVRPSEFYPAREGDAANW 103
           DQKVENDAVVAL LRKDDNEFEEVNIVRP++FY AR+ D ANW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEVNIVRPNDFYQARDADGANW 103


>Glyma04g24070.2 
          Length = 103

 Score =  183 bits (465), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 95/103 (92%)

Query: 1   MDMYIRVKRKMTTYFIRCKPSDKILDVKQKLEELVDQPANNQQLILHGTGEVLEDAKTLA 60
           MDMYIRVKR  TTYFIRCKPSDKILD+KQKL+ELVDQPANNQ+LIL  TGEVLED+KTLA
Sbjct: 1   MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPVTGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALALRKDDNEFEEVNIVRPSEFYPAREGDAANW 103
           DQKVENDAVVAL LRKDDNEFEEVNIVRP++FY AR+ D ANW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEVNIVRPNDFYQARDADGANW 103


>Glyma04g24070.1 
          Length = 103

 Score =  183 bits (465), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 95/103 (92%)

Query: 1   MDMYIRVKRKMTTYFIRCKPSDKILDVKQKLEELVDQPANNQQLILHGTGEVLEDAKTLA 60
           MDMYIRVKR  TTYFIRCKPSDKILD+KQKL+ELVDQPANNQ+LIL  TGEVLED+KTLA
Sbjct: 1   MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPVTGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALALRKDDNEFEEVNIVRPSEFYPAREGDAANW 103
           DQKVENDAVVAL LRKDDNEFEEVNIVRP++FY AR+ D ANW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEVNIVRPNDFYQARDADGANW 103


>Glyma06g30620.3 
          Length = 103

 Score =  177 bits (449), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/103 (81%), Positives = 94/103 (91%)

Query: 1   MDMYIRVKRKMTTYFIRCKPSDKILDVKQKLEELVDQPANNQQLILHGTGEVLEDAKTLA 60
           MDMYIRVKR  TTYFIRCKPSDKILD+KQKL+EL+DQPA NQ+LIL  TGEVLED+KTLA
Sbjct: 1   MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELIDQPAINQRLILPDTGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALALRKDDNEFEEVNIVRPSEFYPAREGDAANW 103
           DQ+VENDAVVAL LRKD+NEFEEVNIVRP++FY AR+ D ANW
Sbjct: 61  DQRVENDAVVALTLRKDENEFEEVNIVRPNDFYQARDADGANW 103


>Glyma06g30620.1 
          Length = 137

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 84/103 (81%), Positives = 94/103 (91%)

Query: 1   MDMYIRVKRKMTTYFIRCKPSDKILDVKQKLEELVDQPANNQQLILHGTGEVLEDAKTLA 60
           MDMYIRVKR  TTYFIRCKPSDKILD+KQKL+EL+DQPA NQ+LIL  TGEVLED+KTLA
Sbjct: 1   MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELIDQPAINQRLILPDTGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALALRKDDNEFEEVNIVRPSEFYPAREGDAANW 103
           DQ+VENDAVVAL LRKD+NEFEEVNIVRP++FY AR+ D ANW
Sbjct: 61  DQRVENDAVVALTLRKDENEFEEVNIVRPNDFYQARDADGANW 103


>Glyma06g30620.4 
          Length = 113

 Score =  166 bits (420), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 79/99 (79%), Positives = 89/99 (89%)

Query: 3   MYIRVKRKMTTYFIRCKPSDKILDVKQKLEELVDQPANNQQLILHGTGEVLEDAKTLADQ 62
           MYIRVKR  TTYFIRCKPSDKILD+KQKL+EL+DQPA NQ+LIL  TGEVLED+KTLADQ
Sbjct: 1   MYIRVKRSKTTYFIRCKPSDKILDIKQKLQELIDQPAINQRLILPDTGEVLEDSKTLADQ 60

Query: 63  KVENDAVVALALRKDDNEFEEVNIVRPSEFYPAREGDAA 101
           +VENDAVVAL LRKD+NEFEEVNIVRP++FY AR+ D  
Sbjct: 61  RVENDAVVALTLRKDENEFEEVNIVRPNDFYQARDADGG 99


>Glyma06g30620.2 
          Length = 96

 Score =  132 bits (333), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 64/77 (83%), Positives = 71/77 (92%)

Query: 1  MDMYIRVKRKMTTYFIRCKPSDKILDVKQKLEELVDQPANNQQLILHGTGEVLEDAKTLA 60
          MDMYIRVKR  TTYFIRCKPSDKILD+KQKL+EL+DQPA NQ+LIL  TGEVLED+KTLA
Sbjct: 1  MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELIDQPAINQRLILPDTGEVLEDSKTLA 60

Query: 61 DQKVENDAVVALALRKD 77
          DQ+VENDAVVAL LRK+
Sbjct: 61 DQRVENDAVVALTLRKE 77


>Glyma13g44910.1 
          Length = 367

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)

Query: 3  MYIRVKRKMTTYF-IRCKPSDKILDVKQKLEELV--DQPANNQQLILHGTGEVLEDAKTL 59
          M + VK    ++F IR +PSD I+ VK+ +E++   D     QQL++H  G+VL+D  TL
Sbjct: 1  MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIH-NGKVLKDETTL 59

Query: 60 ADQKVENDAVVALALRK 76
          +D KV  D  + + L K
Sbjct: 60 SDNKVSEDGFLVVMLSK 76