Miyakogusa Predicted Gene

Lj5g3v1463440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1463440.1 Non Chatacterized Hit- tr|C5WVC6|C5WVC6_SORBI
Putative uncharacterized protein Sb01g016980
OS=Sorghu,41.96,4e-19,seg,NULL,gene.g61759.t1.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g29730.1                                                       198   2e-51
Glyma20g37570.1                                                        62   2e-10

>Glyma10g29730.1 
          Length = 398

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 104/142 (73%), Positives = 111/142 (78%), Gaps = 25/142 (17%)

Query: 1   MDTDYLSRLTHALTTVRHVNKTDVVTLGTTFG-----------------------VKRLF 37
           MDTDYLSRLTH+LTTVRHVNKTDVVTLGTTFG                       VKRLF
Sbjct: 234 MDTDYLSRLTHSLTTVRHVNKTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLF 293

Query: 38  DTFHEPFKRVESSRQAVPETSAQNKPASPDPLMRNNAESSSLIKDK--DVEDVSKRRKEE 95
           DTFHEPFKRVESSRQA+PETS QNKPASP+  +RN AESSSLI+DK  D EDVSKRRK+E
Sbjct: 294 DTFHEPFKRVESSRQAIPETSVQNKPASPESSIRNKAESSSLIEDKQEDTEDVSKRRKKE 353

Query: 96  PELTVKSALSAAFAKYSDRVGK 117
           PE+TVKSALSAAFAKYS RVGK
Sbjct: 354 PEVTVKSALSAAFAKYSGRVGK 375


>Glyma20g37570.1 
          Length = 314

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 57/121 (47%), Gaps = 50/121 (41%)

Query: 9   LTHALTTVRHVNKTDVVTLGTTFGV----------------------------------- 33
           LTHALTTVRHVNKTDVVTLGTTFG                                    
Sbjct: 156 LTHALTTVRHVNKTDVVTLGTTFGYLCNIMGASMEDLARCPGIVGERKVYYQWSSACLTL 215

Query: 34  ----KRLFDTFHEPFKRVESSRQAVPETSAQNKPASPDPLMRNNAESSSLIKDK--DVED 87
                 +++   +PF+R+ S       TS   +P S    +RNNAESSSLI+DK  D ED
Sbjct: 216 FMNPSSMWNPAGKPFQRLLS------RTSQLVRPVSS---IRNNAESSSLIEDKHEDAED 266

Query: 88  V 88
           +
Sbjct: 267 L 267