Miyakogusa Predicted Gene

Lj5g3v1453360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1453360.1 Non Chatacterized Hit- tr|I1JRE7|I1JRE7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37130
PE,67.65,0.000000000000002,seg,NULL,CUFF.55285.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37600.1                                                        52   1e-07
Glyma10g29710.1                                                        51   3e-07

>Glyma20g37600.1 
          Length = 530

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 28/47 (59%), Gaps = 4/47 (8%)

Query: 57  HMMYGRPHP----SMNYXXXXXXXXXXXXXXXTHVFSDENTESCSIM 99
           HMMYGRPHP    SMNY               THVFSDENTESCSIM
Sbjct: 484 HMMYGRPHPHQDPSMNYFPPPPMPSHPMADPITHVFSDENTESCSIM 530


>Glyma10g29710.1 
          Length = 555

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 28/49 (57%), Gaps = 6/49 (12%)

Query: 57  HMMYGRPHP------SMNYXXXXXXXXXXXXXXXTHVFSDENTESCSIM 99
           HMMYGRPHP      SMNY               THVFSDENTESCSIM
Sbjct: 507 HMMYGRPHPHQHQHPSMNYFPPPPMPSHPMADPITHVFSDENTESCSIM 555