Miyakogusa Predicted Gene

Lj5g3v1452200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1452200.1 Non Chatacterized Hit- tr|D8UAB3|D8UAB3_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,35.29,0.000000000001,no description,Membrane transporter,
Tim44-related/Ribosomal protein L45; Tim44,Membrane
transporter,CUFF.55271.1
         (305 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37500.1                                                       526   e-149

>Glyma20g37500.1 
          Length = 309

 Score =  526 bits (1355), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 248/305 (81%), Positives = 278/305 (91%), Gaps = 1/305 (0%)

Query: 1   MMPLKRFHAVRTLYRSSQIGQDSSSYLLGSCRSYSNALSNGSEGNFKSFHSHLFKGHDGF 60
           M P KR H VRTLYRSSQIG +SSSYLLGSC+SYS+ALSNGSEGNF+SFHSHL KG DGF
Sbjct: 2   MTPFKRLHLVRTLYRSSQIG-ESSSYLLGSCKSYSSALSNGSEGNFRSFHSHLLKGQDGF 60

Query: 61  PLAGGKTLTLRSTMAAELSIFMNDKRMLSTQLKGSSLSRAVGTQISVSSPGFIYEPYEPR 120
           P AG K+LTLRSTMAAELSIFMN++RMLSTQ+K S+ +R VG QIS+SSPGFIYEPYEPR
Sbjct: 61  PFAGVKSLTLRSTMAAELSIFMNNRRMLSTQVKASAQARQVGQQISLSSPGFIYEPYEPR 120

Query: 121 EKIPFWQRWFTRSGWKRTKQDVILELKSAYAIQKLRKSGYSKSRFYNEAFKMYKEINALI 180
           +KIPFW+RWFTRSG +RTK D+ILELKSAYAI KLRK+GYSK++FYNEA  MYKEIN LI
Sbjct: 121 DKIPFWKRWFTRSGLRRTKNDIILELKSAYAIAKLRKTGYSKNQFYNEAANMYKEINTLI 180

Query: 181 ANGDKKSLRKAVTEKMYSALKNEIKQRETTWNKVYWELIEPVIRIRTLRARLIGVDPKDL 240
           A GDK++LRKAVTE M+SALKNEIKQRET W++VYWE++EPV++IRTLRARLIGVD KDL
Sbjct: 181 AKGDKRTLRKAVTENMFSALKNEIKQRETAWSRVYWEMVEPVVKIRTLRARLIGVDRKDL 240

Query: 241 NKVFVQLTLEITAKQKFEAYDSKGSVVAGDKNKEVLVRDIWVFEKSMFHPGAYWRLCGRL 300
           NK F+QLTLEI AKQKFEAYDSKGSVVAGDK+KEVLVRDIWVFEKSMFH GA WRLCGR+
Sbjct: 241 NKTFIQLTLEILAKQKFEAYDSKGSVVAGDKSKEVLVRDIWVFEKSMFHAGATWRLCGRI 300

Query: 301 SPKAS 305
           SPKAS
Sbjct: 301 SPKAS 305