Miyakogusa Predicted Gene

Lj5g3v1427760.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1427760.1 CUFF.55353.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37370.1                                                       165   1e-41
Glyma10g30020.1                                                       164   2e-41
Glyma19g42900.1                                                       143   5e-35
Glyma03g40290.1                                                       127   2e-30
Glyma17g02560.1                                                        96   1e-20
Glyma07g38160.1                                                        87   4e-18
Glyma08g43620.1                                                        63   5e-11

>Glyma20g37370.1 
          Length = 546

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/111 (74%), Positives = 94/111 (84%), Gaps = 5/111 (4%)

Query: 1   MLTKPLIRLLLPHTDTKTDSMASL--DPSTP--KSFTVPLLGSAQDSVGDFDAHEIRRPS 56
           +LTKPLIRLLLPHT    +S  ++  DPSTP  KS TVPLLGSAQ+S  D D H+I RPS
Sbjct: 436 LLTKPLIRLLLPHTPHHKESSITITTDPSTPSPKSVTVPLLGSAQESEVDIDGHDIHRPS 495

Query: 57  SIRALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRSNGHQW 107
           SIRALLSTPTHTVHRLWRKFD++FMRPVFGGRGFVP+EPGSP++R NGHQW
Sbjct: 496 SIRALLSTPTHTVHRLWRKFDDAFMRPVFGGRGFVPIEPGSPTER-NGHQW 545


>Glyma10g30020.1 
          Length = 544

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/111 (73%), Positives = 94/111 (84%), Gaps = 5/111 (4%)

Query: 1   MLTKPLIRLLLPHTDTKTDSMASL--DPSTP--KSFTVPLLGSAQDSVGDFDAHEIRRPS 56
           +LTKPLIRLLLPHT    +S  ++  DPSTP  KS T+PLLGSAQ+S  D D H+I RPS
Sbjct: 434 LLTKPLIRLLLPHTPHHKESSITIITDPSTPSPKSVTIPLLGSAQESEVDIDGHDIHRPS 493

Query: 57  SIRALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRSNGHQW 107
           SIRALL+TPTHTVHRLWRKFD++FMRPVFGGRGFVPVEPGSP++R NGHQW
Sbjct: 494 SIRALLTTPTHTVHRLWRKFDDAFMRPVFGGRGFVPVEPGSPTER-NGHQW 543


>Glyma19g42900.1 
          Length = 528

 Score =  143 bits (360), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 4/106 (3%)

Query: 1   MLTKPLIRLLLPHTDT--KTDSMASLDPS--TPKSFTVPLLGSAQDSVGDFDAHEIRRPS 56
           ++TKPLIR LLP      + +SMA++D S  +PKS TVP LG +QDS  +FD  EI RPS
Sbjct: 423 LMTKPLIRFLLPVNPLPKRKNSMANIDSSNNSPKSITVPFLGGSQDSENEFDGSEIHRPS 482

Query: 57  SIRALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRS 102
           SIRALL+TPTHTVH+LWRKFDNSFMRPVFGGRGFVPV P SP+ R+
Sbjct: 483 SIRALLTTPTHTVHQLWRKFDNSFMRPVFGGRGFVPVAPNSPTARN 528


>Glyma03g40290.1 
          Length = 530

 Score =  127 bits (319), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 80/106 (75%), Gaps = 4/106 (3%)

Query: 1   MLTKPLIRLLLPHTD--TKTDSMASLDP--STPKSFTVPLLGSAQDSVGDFDAHEIRRPS 56
           ++TKPLIR LLP      + +SM+ +    ++PKS T+P LG +QDS  +FD  E +RPS
Sbjct: 425 LMTKPLIRFLLPINPPPKRKNSMSDIGSFNNSPKSITMPFLGGSQDSENEFDGSENQRPS 484

Query: 57  SIRALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRS 102
           SIRALL+TPTHTVH+LWR FDNSFMRPVFGGRGFVPV P S + R+
Sbjct: 485 SIRALLTTPTHTVHQLWRNFDNSFMRPVFGGRGFVPVVPTSTTART 530


>Glyma17g02560.1 
          Length = 516

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 68/103 (66%), Gaps = 13/103 (12%)

Query: 1   MLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRA 60
           ++TKPL+RLLLP +     S+ S  PSTPKSFTVPLLGS               PS++R 
Sbjct: 426 LMTKPLVRLLLPWSK-HVMSLPS-PPSTPKSFTVPLLGSQNGP----------PPSTLRM 473

Query: 61  LLST-PTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRS 102
           LLS  PT  VH  WRKFD+S MRPVFGGRGFVP  PGSP ++S
Sbjct: 474 LLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEQS 516


>Glyma07g38160.1 
          Length = 516

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 62/96 (64%), Gaps = 13/96 (13%)

Query: 1   MLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRA 60
           ++TKPL+RLLLP +     S+ S  PSTPKSFTVPLLGS               PS++R 
Sbjct: 432 LMTKPLVRLLLPSSK-HVMSLPS-PPSTPKSFTVPLLGSQNGP----------PPSTLRM 479

Query: 61  LLST-PTHTVHRLWRKFDNSFMRPVFGGRGFVPVEP 95
           LLS  PT  VH  WRKFD+S MRPVFGGRGFVP  P
Sbjct: 480 LLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVP 515


>Glyma08g43620.1 
          Length = 416

 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 6/87 (6%)

Query: 2   LTKPLIRLLLPHTDTKTDSMASLDPSTP-KSFTVPLLGSAQDSVGDFDAHEIRRPSSIRA 60
           LTKPLIR LLPH+ T+  S++  +   P     +P L   + +  +      R  +S+  
Sbjct: 327 LTKPLIRYLLPHSATR-KSISHSESGPPFDDLNLPFLSLEESAATNIS----RAKASLSM 381

Query: 61  LLSTPTHTVHRLWRKFDNSFMRPVFGG 87
           L+ +P  T+HR WR+FD+++MRP+FGG
Sbjct: 382 LIESPVFTIHRYWRRFDDAYMRPIFGG 408