Miyakogusa Predicted Gene

Lj5g3v1426470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1426470.1 Non Chatacterized Hit- tr|I1KFF8|I1KFF8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21048
PE,61.84,0.000000000000004, ,CUFF.55237.1
         (76 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g46430.1                                                        86   1e-17
Glyma12g31850.1                                                        58   2e-09
Glyma12g31850.3                                                        57   7e-09
Glyma12g31850.2                                                        56   1e-08

>Glyma06g46430.1 
          Length = 269

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 7/76 (9%)

Query: 1  MLRVVRSSASRFLTTARLGTISPFASRFSSVRSISDAAPFQKVQIPMVDIDTKFDAYVVG 60
          MLR+    A +F TT  L TISPFA RFS VRSI+D++PF K++I     DT FDAYVVG
Sbjct: 1  MLRI----APKFFTTVPLRTISPFACRFS-VRSIADSSPFNKIRIQR--DDTAFDAYVVG 53

Query: 61 KHDAPGIIVLQDWLGV 76
          K+DAPGI+VLQ+W GV
Sbjct: 54 KNDAPGIVVLQEWWGV 69


>Glyma12g31850.1 
          Length = 245

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 34/42 (80%)

Query: 35 SDAAPFQKVQIPMVDIDTKFDAYVVGKHDAPGIIVLQDWLGV 76
          ++++PF+K+QI   D  + FDAYVVGK DAPGI+V+Q+W GV
Sbjct: 4  TESSPFKKIQIQRDDTVSTFDAYVVGKEDAPGIVVIQEWWGV 45


>Glyma12g31850.3 
          Length = 243

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 2/42 (4%)

Query: 35 SDAAPFQKVQIPMVDIDTKFDAYVVGKHDAPGIIVLQDWLGV 76
          ++++PF+K+QI     DT FDAYVVGK DAPGI+V+Q+W GV
Sbjct: 4  TESSPFKKIQIQR--DDTTFDAYVVGKEDAPGIVVIQEWWGV 43


>Glyma12g31850.2 
          Length = 175

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 2/42 (4%)

Query: 35 SDAAPFQKVQIPMVDIDTKFDAYVVGKHDAPGIIVLQDWLGV 76
          ++++PF+K+QI     DT FDAYVVGK DAPGI+V+Q+W GV
Sbjct: 4  TESSPFKKIQIQR--DDTTFDAYVVGKEDAPGIVVIQEWWGV 43