Miyakogusa Predicted Gene

Lj5g3v1425440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1425440.1 CUFF.55239.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20450.1                                                       132   1e-31
Glyma07g01060.1                                                       130   3e-31
Glyma20g03170.1                                                        50   8e-07

>Glyma08g20450.1 
          Length = 130

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/96 (71%), Positives = 76/96 (79%), Gaps = 11/96 (11%)

Query: 50  PQNDADSPSKLLASQGFLYPCGLPDLSFFLPQATVDVSYECPSNEEDPMLLFPKRSYQPS 109
           PQNDA+ P K    QGFLYPCGLP L FFLPQ       + PS++ DPMLLFPKR+YQPS
Sbjct: 46  PQNDAEFPHK----QGFLYPCGLPSLRFFLPQG------DAPSSD-DPMLLFPKRTYQPS 94

Query: 110 TLRRKRVHGFFARKATKGGRRVIARRIAKGRSRITA 145
            +RRKR HGFFARKATKGGRRVIARR+AKGR RITA
Sbjct: 95  VIRRKRNHGFFARKATKGGRRVIARRLAKGRFRITA 130


>Glyma07g01060.1 
          Length = 131

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 75/96 (78%), Gaps = 11/96 (11%)

Query: 50  PQNDADSPSKLLASQGFLYPCGLPDLSFFLPQATVDVSYECPSNEEDPMLLFPKRSYQPS 109
           PQNDA+ P     +QGFLYPCGLP L FFLP        E PS++ DPMLLFPKR+YQPS
Sbjct: 47  PQNDAEFPH----TQGFLYPCGLPSLRFFLPHG------EAPSSD-DPMLLFPKRTYQPS 95

Query: 110 TLRRKRVHGFFARKATKGGRRVIARRIAKGRSRITA 145
            +RRKR HGFFARKATKGGRRVIARR+AKGR RITA
Sbjct: 96  VIRRKRNHGFFARKATKGGRRVIARRLAKGRFRITA 131


>Glyma20g03170.1 
          Length = 80

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 26/33 (78%)

Query: 90  CPSNEEDPMLLFPKRSYQPSTLRRKRVHGFFAR 122
           C  +  +PMLLF KR+YQPS +RRKR HGFFAR
Sbjct: 48  CAPSSYNPMLLFLKRTYQPSVIRRKRNHGFFAR 80