Miyakogusa Predicted Gene

Lj5g3v1415300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1415300.1 Non Chatacterized Hit- tr|F6GSN7|F6GSN7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.81,0.00000000000008, ,gene.g61674.t1.1
         (450 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g11610.1                                                       105   1e-22
Glyma07g31630.1                                                        50   5e-06

>Glyma07g11610.1 
          Length = 1214

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 1/108 (0%)

Query: 183 ADKDNSTVVQNWEKTRWVNISDARTSYAYNPELLAYKFTTDSKTGRCSGFSGLGGVGFDL 242
           ++ D + +++ WEK   V ISDA  +  YNPE LA +FTTDSK+GR  GF GLG +GF +
Sbjct: 125 SEDDLTAIIKVWEKVYGVKISDAANADVYNPEQLASEFTTDSKSGRRVGFIGLGAMGFGM 184

Query: 243 ATQLLSSYFFKVVYDVYESPLFRYANVGVLVMKSP-EVRKDVDVPMLL 289
           AT LLSS F  V +DVY+  L R++N G L+  SP EV KD DV +++
Sbjct: 185 ATHLLSSKFCVVGFDVYKPTLTRFSNAGGLIGNSPAEVSKDADVLIIM 232


>Glyma07g31630.1 
          Length = 907

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 34 WETFHECSYNEDKEESDLLNGGQIQRKLSDSENNIEKIGDFLSFEKSIVQG 84
          WET  + + +ED+EE D L GG+ Q  LS  E +I +I DFLSFE++ V G
Sbjct: 10 WETSSDSNSSEDQEEIDFLYGGKAQSILSSLEESIGRIDDFLSFERAFVHG 60