Miyakogusa Predicted Gene
- Lj5g3v1381580.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1381580.2 tr|Q9AT24|Q9AT24_PEA Histone H1 (Fragment)
OS=Pisum sativum GN=His1 PE=3 SV=1,64.94,4e-19,seg,NULL;
Linker_histone,Histone H1/H5; "Winged helix" DNA-binding domain,NULL;
HISTONEH5,Histone H5,CUFF.55202.2
(197 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g30560.1 119 2e-27
Glyma20g36880.1 119 3e-27
Glyma20g36880.2 115 4e-26
Glyma02g15910.1 91 1e-18
Glyma02g15910.2 90 1e-18
Glyma02g01860.1 90 2e-18
Glyma08g15810.1 87 1e-17
Glyma10g03840.1 86 3e-17
Glyma11g08000.1 72 5e-13
Glyma08g05710.1 70 2e-12
Glyma05g33890.1 69 3e-12
Glyma05g33890.2 69 3e-12
Glyma10g01940.1 69 3e-12
Glyma19g27610.1 61 8e-10
Glyma09g30800.1 59 3e-09
Glyma0856s00200.1 58 8e-09
Glyma08g20270.1 57 2e-08
Glyma07g00930.1 52 5e-07
Glyma01g40220.1 50 1e-06
Glyma05g22500.1 50 1e-06
Glyma11g33690.1 49 2e-06
Glyma17g17370.1 49 3e-06
Glyma18g04520.1 49 4e-06
Glyma11g05070.1 49 5e-06
>Glyma10g30560.1
Length = 190
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/69 (85%), Positives = 64/69 (92%)
Query: 15 LSHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKL 74
LSHPPFA MI EAIASLKERTGSSQ+AITK+IEGKHKELP T++KL+L LKKSVAAGKL
Sbjct: 19 LSHPPFAVMIAEAIASLKERTGSSQYAITKYIEGKHKELPATYKKLVLVHLKKSVAAGKL 78
Query: 75 VKVKNSFKL 83
VKVKNSFKL
Sbjct: 79 VKVKNSFKL 87
>Glyma20g36880.1
Length = 190
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/69 (86%), Positives = 64/69 (92%)
Query: 15 LSHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKL 74
LSHP FA MI EAIASLKERTGSSQ+AITKFIEGKHKELPPT++KL+L LKKSVAAGKL
Sbjct: 19 LSHPTFAVMIAEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLVHLKKSVAAGKL 78
Query: 75 VKVKNSFKL 83
VKVKNSFKL
Sbjct: 79 VKVKNSFKL 87
>Glyma20g36880.2
Length = 189
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/69 (86%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Query: 15 LSHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKL 74
LSHP FA MI EAIASLKERTGSSQ+AITKFIEGKHKELPPT++KL+L LKKSVAAGKL
Sbjct: 19 LSHPTFA-MIAEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLVHLKKSVAAGKL 77
Query: 75 VKVKNSFKL 83
VKVKNSFKL
Sbjct: 78 VKVKNSFKL 86
>Glyma02g15910.1
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 58/68 (85%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+HP + EMI +AI SLKE+TGSSQHAI KFIE KHK+LPP FRKL+L+ LKK VAAGKLV
Sbjct: 54 THPSYEEMIKDAITSLKEKTGSSQHAIAKFIEEKHKQLPPNFRKLLLYHLKKLVAAGKLV 113
Query: 76 KVKNSFKL 83
KVK SFKL
Sbjct: 114 KVKGSFKL 121
>Glyma02g15910.2
Length = 263
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 58/68 (85%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+HP + EMI +AI SLKE+TGSSQHAI KFIE KHK+LPP FRKL+L+ LKK VAAGKLV
Sbjct: 54 THPSYEEMIKDAITSLKEKTGSSQHAIAKFIEEKHKQLPPNFRKLLLYHLKKLVAAGKLV 113
Query: 76 KVKNSFKL 83
KVK SFKL
Sbjct: 114 KVKGSFKL 121
>Glyma02g01860.1
Length = 190
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 17 HPPFAEMITEAIASLKERTGSSQHAITKFIEGKH-KELPPTFRKLILHQLKKSVAAGKLV 75
HPP+ EMI +AI+SLK+RTGSSQ AI KFIE KH K LPP FRKL+ QLKK V + KL
Sbjct: 16 HPPYFEMIADAISSLKDRTGSSQPAIAKFIEDKHSKVLPPNFRKLLSVQLKKLVKSEKLY 75
Query: 76 KVKNSFKL 83
KVKNS+KL
Sbjct: 76 KVKNSYKL 83
>Glyma08g15810.1
Length = 71
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 52/60 (86%)
Query: 24 ITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLVKVKNSFKL 83
+ EAIASL+E GSSQ+A TKFI+GKHKELPPT+ KL+L +L K+VAA KL+KVKNSFKL
Sbjct: 1 VAEAIASLEEIIGSSQYAKTKFIKGKHKELPPTYTKLVLIRLNKTVAASKLIKVKNSFKL 60
>Glyma10g03840.1
Length = 297
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 58/68 (85%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+HP + EM+ +AI SLKE+TGSSQ+AI KFIE KHK+LPP F+KL+L+ LKK VAAGKLV
Sbjct: 54 THPSYEEMVKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLYHLKKLVAAGKLV 113
Query: 76 KVKNSFKL 83
KVK SFKL
Sbjct: 114 KVKGSFKL 121
>Glyma11g08000.1
Length = 192
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKE-LPPTFRKLILHQLKKSVAAGKL 74
SHPP+ +MI +A+ +L E+ GSS +AI K++E KHK LP F+K++ QLK A GKL
Sbjct: 45 SHPPYLQMIKDALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKL 104
Query: 75 VKVKNSFKL 83
VK+K S+KL
Sbjct: 105 VKIKASYKL 113
>Glyma08g05710.1
Length = 413
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+HPP+ EMI AI +LKE+ GSS+ AI K++E +K+LPPT L+ H L + +AG L+
Sbjct: 33 NHPPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKDLPPTHSALLTHHLNRLKSAGLLI 92
Query: 76 KVKNSFKL 83
VK S+KL
Sbjct: 93 LVKKSYKL 100
>Glyma05g33890.1
Length = 383
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 17 HPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLVK 76
HPP+ EMI AI +LKER GSS+ AI K+IE +K+LPPT L+ H L + ++ LV
Sbjct: 9 HPPYDEMIYTAIGALKERDGSSKRAIGKYIEQVYKDLPPTHPALLTHHLNRLKSSALLVL 68
Query: 77 VKNSFKL 83
VK S+KL
Sbjct: 69 VKKSYKL 75
>Glyma05g33890.2
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 17 HPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLVK 76
HPP+ EMI AI +LKER GSS+ AI K+IE +K+LPPT L+ H L + ++ LV
Sbjct: 9 HPPYDEMIYTAIGALKERDGSSKRAIGKYIEQVYKDLPPTHPALLTHHLNRLKSSALLVL 68
Query: 77 VKNSFKL 83
VK S+KL
Sbjct: 69 VKKSYKL 75
>Glyma10g01940.1
Length = 157
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 23 MITEAIASLKERTGSSQHAITKFIEGKH-KELPPTFRKLILHQLKKSVAAGKLVKVKNSF 81
+I +AI+SLKE GSSQ AI KFIE KH K LPP FRKL+ QLKK V + KL KVKN +
Sbjct: 20 VIADAISSLKECKGSSQPAIAKFIEDKHTKVLPPNFRKLLSVQLKKLVKSEKLYKVKNFY 79
Query: 82 KL 83
KL
Sbjct: 80 KL 81
>Glyma19g27610.1
Length = 226
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+HPP+AEMI AI +LKE+ GSS+ AI K+IE + +LPP L+ L + G L
Sbjct: 30 NHPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSNLLTQHLTHLKSRGLLQ 89
Query: 76 KVKNSFKL 83
VK S+ L
Sbjct: 90 MVKKSYAL 97
>Glyma09g30800.1
Length = 469
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+HPP+AEMI AI +LKE+ GSS+ AI K+IE + +LPP L+ L + G L
Sbjct: 37 NHPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSDLLTQHLNHLKSRGLLQ 96
Query: 76 KVKNSFKL 83
VK S+ L
Sbjct: 97 MVKKSYAL 104
>Glyma0856s00200.1
Length = 195
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKE-LPPTFRKLILHQLKKSVAAGKL 74
+HPP+AEMI AI +LKE+ GSS+ AI K+IE +KE LPP L+ L ++G L
Sbjct: 37 NHPPYAEMIYTAIEALKEKEGSSKRAIAKYIEQVYKEHLPPNHSILLTQHLTLLKSSGML 96
Query: 75 VKVKNSFKL 83
VK S+ L
Sbjct: 97 QMVKKSYAL 105
>Glyma08g20270.1
Length = 281
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 17 HPP-FAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+PP + MI EA+++LK+ GS +AI KF+E K+ ++ FR+ + +L++ V+ GKL
Sbjct: 115 NPPRYNAMIFEALSALKDSNGSDMNAIIKFMEQKNLQVNQNFRRALSTKLRRLVSQGKLE 174
Query: 76 KVKNSFKL 83
KV+N +K+
Sbjct: 175 KVQNGYKV 182
>Glyma07g00930.1
Length = 285
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 17 HPP-FAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
+PP + +I EA+++LK+ GS +AI KF+E K+ ++ F++ + +L++ V+ GKL
Sbjct: 119 NPPRYNALIFEALSALKDSNGSDMNAIIKFMEQKNHQVNQNFKRALSTRLRRLVSQGKLE 178
Query: 76 KVKNSFKL 83
KV N +K+
Sbjct: 179 KVPNGYKV 186
>Glyma01g40220.1
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 20 FAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLVKVKN 79
+I E+I LKE GS Q AI +IE ++ PT RKL+ +LK VA+GKL+KVK+
Sbjct: 127 LDNLILESIIKLKEPRGSDQAAIAAYIEDQYCS-TPTLRKLLSTKLKHMVASGKLMKVKH 185
Query: 80 SFKL 83
+++
Sbjct: 186 KYRI 189
>Glyma05g22500.1
Length = 296
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 24 ITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLVKVKNSFKL 83
I EAI ++KE+ GS + AI FIE K++ PP KL+ +LK VA+GK+VK K+ +++
Sbjct: 127 ILEAIVNMKEQKGSDKVAIASFIEEKYRS-PPNLSKLLSTKLKHMVASGKIVKEKHKYRI 185
>Glyma11g33690.1
Length = 184
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
S PP+ EMI EAI +L E GS++ +I+K+IE + LP + L+ L K +G LV
Sbjct: 12 SLPPYPEMIREAIEALNEENGSNKSSISKYIESTYGGLPQAHKVLLNVHLAKMRESGVLV 71
Query: 76 KVKNSF 81
KN++
Sbjct: 72 FWKNNY 77
>Glyma17g17370.1
Length = 295
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 24 ITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLVKVKNSFKL 83
I EAI +KE+ GS + AI FIE K++ PP KL+ +LK VA+GK++K K+ +++
Sbjct: 127 ILEAIVYMKEQKGSDKAAIASFIEEKYR-FPPNLSKLLPAKLKHMVASGKIIKEKHKYRI 185
>Glyma18g04520.1
Length = 182
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 16 SHPPFAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLV 75
S PP+ EMI EAI +L E GS++ +I+K+IE + LP + L+ L K +G LV
Sbjct: 12 SLPPYPEMILEAIEALNEDNGSNKSSISKYIESTYGGLPQGHKVLLNVHLAKMRDSGVLV 71
Query: 76 KVKNSF 81
KN++
Sbjct: 72 FWKNNY 77
>Glyma11g05070.1
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 20 FAEMITEAIASLKERTGSSQHAITKFIEGKHKELPPTFRKLILHQLKKSVAAGKLVKVKN 79
+I E+I LKE GS + AI +IE ++ P T RKL+ +LK VA GKL+KVK+
Sbjct: 127 LDNLILESIIKLKEPRGSDKAAIAAYIEDQYCSTP-TLRKLLSTKLKHMVACGKLMKVKH 185
Query: 80 SFKL 83
+++
Sbjct: 186 KYRI 189