Miyakogusa Predicted Gene

Lj5g3v1359430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1359430.1 tr|G7IR90|G7IR90_MEDTR Thymidylate kinase
OS=Medicago truncatula GN=MTR_2g084750 PE=3
SV=1,82.01,0,Thymidylate_kin,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; THYMIDYLATE
KINASE,,NODE_61823_length_782_cov_90.118927.path1.1
         (234 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g35240.2                                                       383   e-107
Glyma13g35240.1                                                       383   e-107
Glyma05g23030.1                                                        71   8e-13
Glyma14g36680.1                                                        65   4e-11

>Glyma13g35240.2 
          Length = 262

 Score =  383 bits (984), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/240 (81%), Positives = 207/240 (86%), Gaps = 8/240 (3%)

Query: 1   MIYGTFRS------FTPLVLLQNSLNSRVKFSSKCSPRKITMEGRKLNCSMEGNINESRG 54
           MIYGT  +      F  LVL Q  LN +VKFSSKC P KI ME   LN S+EGN   SRG
Sbjct: 1   MIYGTCVTASKSLIFRALVL-QKPLNFQVKFSSKCFPTKIRMES-NLNHSIEGNNKASRG 58

Query: 55  ALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLDDH 114
           ALVVLEGLDRSGKSSQC+RLVS+LEGQGI+AEL RFPDRTT+VGQMISAYLTNTSQLDDH
Sbjct: 59  ALVVLEGLDRSGKSSQCSRLVSFLEGQGISAELWRFPDRTTNVGQMISAYLTNTSQLDDH 118

Query: 115 TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLLAP 174
           TIHLLFSANRWEKRSLME+KLK+GTTLIVDRYSYSGVAFSSAKGL+FEWCK PEIGL AP
Sbjct: 119 TIHLLFSANRWEKRSLMESKLKTGTTLIVDRYSYSGVAFSSAKGLDFEWCKVPEIGLPAP 178

Query: 175 DLVAYLDISPEKAAERGGYGDERYEKLEFQKKVARSYKVLHDHSWKVVDACQPIEDVEKQ 234
           D+V YLDISPEKAAERGGYG ERYEKLEFQKKVA  YKVLHD SWK VDACQPIEDVEKQ
Sbjct: 179 DVVVYLDISPEKAAERGGYGGERYEKLEFQKKVADWYKVLHDVSWKDVDACQPIEDVEKQ 238


>Glyma13g35240.1 
          Length = 262

 Score =  383 bits (984), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/240 (81%), Positives = 207/240 (86%), Gaps = 8/240 (3%)

Query: 1   MIYGTFRS------FTPLVLLQNSLNSRVKFSSKCSPRKITMEGRKLNCSMEGNINESRG 54
           MIYGT  +      F  LVL Q  LN +VKFSSKC P KI ME   LN S+EGN   SRG
Sbjct: 1   MIYGTCVTASKSLIFRALVL-QKPLNFQVKFSSKCFPTKIRMES-NLNHSIEGNNKASRG 58

Query: 55  ALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLDDH 114
           ALVVLEGLDRSGKSSQC+RLVS+LEGQGI+AEL RFPDRTT+VGQMISAYLTNTSQLDDH
Sbjct: 59  ALVVLEGLDRSGKSSQCSRLVSFLEGQGISAELWRFPDRTTNVGQMISAYLTNTSQLDDH 118

Query: 115 TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLLAP 174
           TIHLLFSANRWEKRSLME+KLK+GTTLIVDRYSYSGVAFSSAKGL+FEWCK PEIGL AP
Sbjct: 119 TIHLLFSANRWEKRSLMESKLKTGTTLIVDRYSYSGVAFSSAKGLDFEWCKVPEIGLPAP 178

Query: 175 DLVAYLDISPEKAAERGGYGDERYEKLEFQKKVARSYKVLHDHSWKVVDACQPIEDVEKQ 234
           D+V YLDISPEKAAERGGYG ERYEKLEFQKKVA  YKVLHD SWK VDACQPIEDVEKQ
Sbjct: 179 DVVVYLDISPEKAAERGGYGGERYEKLEFQKKVADWYKVLHDVSWKDVDACQPIEDVEKQ 238


>Glyma05g23030.1 
          Length = 43

 Score = 71.2 bits (173), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/41 (78%), Positives = 37/41 (90%)

Query: 134 KLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLLAP 174
           K+++GTT IVDRYSYSGVAFSSAKGL+FE CK P+IGL AP
Sbjct: 1   KIETGTTFIVDRYSYSGVAFSSAKGLDFERCKVPKIGLSAP 41


>Glyma14g36680.1 
          Length = 38

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/37 (81%), Positives = 33/37 (89%)

Query: 128 RSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWC 164
           RSLMETK+K+GTTLIVDR SYSGV FS AKGL+ EWC
Sbjct: 1   RSLMETKMKTGTTLIVDRCSYSGVTFSFAKGLDIEWC 37