Miyakogusa Predicted Gene

Lj5g3v1340870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1340870.1 Non Chatacterized Hit- tr|D7FGX7|D7FGX7_ECTSI
Putative uncharacterized protein OS=Ectocarpus
silicul,41.18,3e-16,SUBFAMILY NOT NAMED,NULL; THYROID RECEPTOR
INTERACTING PROTEIN RELATED,NULL; no description,NULL,CUFF.55158.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g36490.1                                                       289   7e-79
Glyma10g30980.1                                                       283   4e-77
Glyma14g16910.1                                                        92   3e-19

>Glyma20g36490.1 
          Length = 283

 Score =  289 bits (740), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 134/153 (87%), Positives = 146/153 (95%)

Query: 1   MEYFYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCLKREELASWEMVPEGVRLEAQTD 60
           MEYFYKEIYALNGI+DI FPQHYPVSRLLGCVEVVGCL R+ELA WEMVPEGVRLEAQTD
Sbjct: 63  MEYFYKEIYALNGISDIQFPQHYPVSRLLGCVEVVGCLTRDELACWEMVPEGVRLEAQTD 122

Query: 61  FCWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGLSPVDSPLPVKFPLPDPRDPFSL 120
           +CWLCE PQKLLIPFEMRGYQGVYNLE+KIYEAAVRGLSPV+SP+PVKFPLPDPR+PFSL
Sbjct: 123 YCWLCEWPQKLLIPFEMRGYQGVYNLEKKIYEAAVRGLSPVNSPMPVKFPLPDPRNPFSL 182

Query: 121 RPGRIAALTPNLKATEVDKSSSVSLAIAGARAA 153
           +PG I+ALT NLKA+EVDKSSS+SLAIAGA+ A
Sbjct: 183 KPGSISALTSNLKASEVDKSSSISLAIAGAQTA 215


>Glyma10g30980.1 
          Length = 328

 Score =  283 bits (725), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 130/145 (89%), Positives = 141/145 (97%)

Query: 1   MEYFYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCLKREELASWEMVPEGVRLEAQTD 60
           MEYFYKEIYALNGITDI FPQHYPVSRLLGCVEVVGCL R+ELA WEMVPEGVR+EAQTD
Sbjct: 63  MEYFYKEIYALNGITDIQFPQHYPVSRLLGCVEVVGCLTRDELACWEMVPEGVRVEAQTD 122

Query: 61  FCWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGLSPVDSPLPVKFPLPDPRDPFSL 120
           +CWLCE+PQKLLIPFEMRGYQGVYNLE+KIYEAAVRGLSPV+SPLPVKFPLPDP++PFSL
Sbjct: 123 YCWLCERPQKLLIPFEMRGYQGVYNLEKKIYEAAVRGLSPVNSPLPVKFPLPDPQNPFSL 182

Query: 121 RPGRIAALTPNLKATEVDKSSSVSL 145
           +PG I+ALTPNLKATEVDKSSS+SL
Sbjct: 183 KPGSISALTPNLKATEVDKSSSISL 207


>Glyma14g16910.1 
          Length = 58

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/58 (79%), Positives = 51/58 (87%)

Query: 90  IYEAAVRGLSPVDSPLPVKFPLPDPRDPFSLRPGRIAALTPNLKATEVDKSSSVSLAI 147
           IYEA VRGLSPV+S LP+KFPL DPR+PFSL+PG I+ LT NLKATEVDKSSS SLAI
Sbjct: 1   IYEAIVRGLSPVNSQLPMKFPLLDPRNPFSLKPGSISMLTLNLKATEVDKSSSTSLAI 58