Miyakogusa Predicted Gene

Lj5g3v1315660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1315660.1 Non Chatacterized Hit- tr|K4AJZ1|K4AJZ1_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,65.67,1e-16,ARE1-LIKE PROTEIN,NULL; SUPPRESSOR OF ACTIN MUTATIONS
2/VACUOLAR PROTEIN SORTING 52,Vps52/Sac2,FS355688.path1.1
         (67 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g43870.1                                                       140   4e-34
Glyma03g41250.1                                                       140   4e-34

>Glyma19g43870.1 
          Length = 707

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/67 (100%), Positives = 67/67 (100%)

Query: 1   MHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSALNKDLVSISSIMYEI 60
           MHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSALNKDLVSISSIMYEI
Sbjct: 641 MHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSALNKDLVSISSIMYEI 700

Query: 61  RKYSRTF 67
           RKYSRTF
Sbjct: 701 RKYSRTF 707


>Glyma03g41250.1 
          Length = 707

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/67 (100%), Positives = 67/67 (100%)

Query: 1   MHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSALNKDLVSISSIMYEI 60
           MHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSALNKDLVSISSIMYEI
Sbjct: 641 MHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSALNKDLVSISSIMYEI 700

Query: 61  RKYSRTF 67
           RKYSRTF
Sbjct: 701 RKYSRTF 707